9CZM | pdb_00009czm

Ca2+ bound open-inactivated hSlo1 + beta2N-beta4 channel in nanodisc.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth D]WD40e9czmD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
F [auth C]WD40e9czmC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
E [auth B]WD40e9czmB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
D [auth A]WD40e9czmA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
H [auth G]WD40e9czmG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
C [auth H]WD40e9czmH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
B [auth F]WD40e9czmF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
A [auth E]WD40e9czmE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth A],
E [auth B],
F [auth C],
G [auth D]		PF21014Ca2+-activated K+ channel Slowpoke, TrkA_C like domain (Slowpoke_C)Ca2+-activated K+ channel Slowpoke, TrkA_C like domainThis domain is found at the cytoplasmic C-terminus of the drosophila slowpoke K+ channel. It is related to the TrkA C-terminal domain Pfam:PF02080. Domain
D [auth A],
E [auth B],
F [auth C],
G [auth D]		PF03493Calcium-activated BK potassium channel alpha subunit (BK_channel_a)Calcium-activated BK potassium channel alpha subunit- Family
D [auth A],
E [auth B],
F [auth C],
G [auth D]		PF00520Ion transport protein (Ion_trans)Ion transport protein- Family
D [auth A],
E [auth B],
F [auth C],
G [auth D]		PF22614Calcium-activated potassium channel slowpoke-like RCK domain (Slo-like_RCK)Calcium-activated potassium channel slowpoke-like RCK domainThis entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KC ...This entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KCNU1. This entry represents the C-terminal regulator of K+ conductance (RCK) domains which appear as tandem domains in these proteins [1-5]. The RCK domain has a Rossmann-fold topology with unique positions that compose a well-conserved salt bridge and a hydrophobic dimer interface. This domain is also presents in prokaryotic K+ channels.
Domain
A [auth E],
B [auth F],
C [auth H],
H [auth G]		PF03185Calcium-activated potassium channel, beta subunit (CaKB)Calcium-activated potassium channel, beta subunit- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth A],
E [auth B],
F [auth C],
G [auth D]		Isoform 5 of Calcium-activated potassium channel subunit alpha-1
A [auth E],
B [auth F],
C [auth H],
H [auth G]		Large-conductance Ca2+-activated K+ channel beta2 subunit,Calcium-activated potassium channel subunit beta-4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR047871Calcium-activated potassium channel slowpoke-likeFamily
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR003148Regulator of K+ conductance, N-terminal lobeDomain
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR005821Ion transport domainDomain
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR003929Calcium-activated potassium channel BK, alpha subunitDomain
D [auth A],
E [auth B],
F [auth C],
G [auth D]		IPR048735Ca2+-activated K+ channel Slowpoke-like, C-terminal domainDomain
A [auth E],
B [auth F],
C [auth H],
H [auth G]		IPR037096KCNMB2, ball/chain domain superfamilyHomologous Superfamily
A [auth E],
B [auth F],
C [auth H],
H [auth G]		IPR015382KCNMB2, ball/chain domainDomain
A [auth E],
B [auth F],
C [auth H],
H [auth G]		IPR003930Potassium channel, calcium-activated, BK, beta subunitFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth A],
E [auth B],
F [auth C],
G [auth D]		:  Q12791
A [auth E],
B [auth F],
C [auth H],
H [auth G]		:  Q86W47

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM