9EPC | pdb_00009epc

Cryo-EM structure of the Plastid-encoded RNA polymerase from Sinapis alba

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G	PPR, PPR_2, PPR_3, PPR_long, TPR_24	e9epcG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PPR, PPR_2, PPR_3, PPR_long, TPR_24	ECOD (v295.2)
D	WD40	e9epcD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
C	Glyco_hydro_10	e9epcC2	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Glyco_hydro_10	ECOD (v295.2)
T	WD40	e9epcT1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
S	WD40	e9epcS1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
Q	WD40	e9epcQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
N	WD40	e9epcN1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
L	WD40	e9epcL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
K	WD40	e9epcK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
B	WD40	e9epcB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
A	WD40	e9epcA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
J	PAP5, pTAC12, HEMERA	-	response to light stimulus response to stimulus response to radiation response to abiotic stimulus plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription response to light stimulus response to stimulus response to radiation response to abiotic stimulus plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular response to stimulus positive regulation of cell communication cellular response to red or far red light regulation of cellular process positive regulation of signal transduction signaling positive regulation of biological process regulation of response to red or far red light regulation of signal transduction response to red or far red light cell communication cellular response to environmental stimulus positive regulation of response to stimulus positive regulation of red or far-red light signaling pathway cellular response to light stimulus signal transduction positive regulation of cellular process regulation of biological process regulation of signaling red or far-red light signaling pathway biological regulation cellular response to radiation regulation of response to stimulus regulation of cell communication cellular response to abiotic stimulus regulation of red or far-red light signaling pathway positive regulation of signaling positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process regulation of primary metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of macromolecule metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast nucleus
I	PAP4, FSD3	cation binding ion binding binding metal ion binding small molecule binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity antioxidant activity catalytic activity	-	membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma cytoplasm chloroplast
H	PAP3, pTAC10	RNA binding binding nucleic acid binding	-	membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma cytoplasm chloroplast nucleus protein-containing complex catalytic complex transferase complex plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups RNA polymerase complex DNA-directed RNA polymerase complex intracellular protein-containing complex
G	PAP2, pTAC2	-	-	-
F	PAP1, pTAC3	-	-	-
E	DNA-directed RNA polymerase subunit beta''	DNA binding binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity DNA binding binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast
D	DNA-directed RNA polymerase subunit beta'	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding DNA binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding DNA binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups transition metal ion binding zinc ion binding	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast
C	RpoB, subunit beta	DNA binding binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups ribonucleoside binding nucleoside binding DNA binding binding nucleic acid binding DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups ribonucleoside binding nucleoside binding heterocyclic compound binding carbohydrate derivative binding small molecule binding	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast
U	PRIN2, PLASTID REDOX INSENSITIVE 2	-	regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	-
T	pTAC18	-	-	-
S	FLN2	-	plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization organelle organization plastid organization etioplast organization cellular component organization or biogenesis chloroplast organization	membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma cytoplasm chloroplast
R	PAP12, pTAC7	-	plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex plastid transferase complex intracellular membrane-bounded organelle plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle RNA polymerase complex DNA-directed RNA polymerase complex membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex plastid transferase complex intracellular membrane-bounded organelle plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle RNA polymerase complex DNA-directed RNA polymerase complex cytoplasm intracellular protein-containing complex
Q	PAP11, MurE-like	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding acid-amino acid ligase activity catalytic activity ligase activity, forming carbon-nitrogen bonds ligase activity	developmental process regulation of biological process regulation of developmental process biological regulation regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of biological quality regulation of anatomical structure morphogenesis cellular process cell division	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast
O, P	PAP10, TRXz	oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity catalytic activity, acting on a protein protein-disulfide reductase activity catalytic activity	cell redox homeostasis cellular homeostasis homeostatic process cellular component organization organelle organization plastid organization cellular process cellular component organization or biogenesis	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast membraneless organelle intracellular membraneless organelle thylakoid
N	PAP9, FSD2	cation binding ion binding binding metal ion binding small molecule binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity antioxidant activity catalytic activity	response to light stimulus response to stimulus response to radiation response to abiotic stimulus	membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma cytoplasm chloroplast
M	PAP8, pTAC6	-	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex plastid transferase complex intracellular membrane-bounded organelle plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle RNA polymerase complex DNA-directed RNA polymerase complex membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex plastid transferase complex intracellular membrane-bounded organelle plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups intracellular organelle cellular anatomical structure organelle RNA polymerase complex DNA-directed RNA polymerase complex cytoplasm intracellular protein-containing complex
L	PAP7, pTAC14	protein-lysine N-methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups lysine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity	plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process membrane organization cellular component organization plastid membrane organization organelle organization plastid organization cellular component organization or biogenesis thylakoid membrane organization chloroplast organization	membrane-bounded organelle intracellular anatomical structure plastid intracellular membraneless organelle intracellular membrane-bounded organelle plastid thylakoid intracellular organelle cellular anatomical structure chloroplast thylakoid organelle membraneless organelle cytoplasm thylakoid chloroplast membrane-bounded organelle intracellular anatomical structure plastid intracellular membraneless organelle intracellular membrane-bounded organelle plastid thylakoid intracellular organelle cellular anatomical structure chloroplast thylakoid organelle membraneless organelle cytoplasm thylakoid chloroplast protein-containing complex catalytic complex transferase complex plastid-encoded plastid RNA polymerase complex transferase complex, transferring phosphorus-containing groups RNA polymerase complex DNA-directed RNA polymerase complex intracellular protein-containing complex
K	PAP6, FLN1	kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process plastid transcription RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization organelle organization plastid organization chloroplast organization cellular component organization or biogenesis	membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma membrane-bounded organelle intracellular anatomical structure plastid plastid nucleoid intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure chloroplast nucleoid plastid stroma organelle membraneless organelle chloroplast stroma cytoplasm chloroplast
A, B	DNA-directed RNA polymerase subunit alpha	DNA binding binding nucleic acid binding protein binding protein dimerization activity DNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J	IPR034581	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12	Family
I	IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	Homologous Superfamily
I	IPR001189	Manganese/iron superoxide dismutase	Family
I	IPR019833	Manganese/iron superoxide dismutase, binding site	Binding Site
I	IPR019832	Manganese/iron superoxide dismutase, C-terminal	Domain
I	IPR019831	Manganese/iron superoxide dismutase, N-terminal	Domain
I	IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Homologous Superfamily
H	IPR003029	S1 domain	Domain
H	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
H	IPR044967	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10	Family
F	IPR003034	SAP domain	Domain
F	IPR036361	SAP domain superfamily	Homologous Superfamily
F	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
E	IPR007081	RNA polymerase Rpb1, domain 5	Domain
E	IPR007083	RNA polymerase Rpb1, domain 4	Domain
E	IPR038120	RNA polymerase Rpb1, funnel domain superfamily	Homologous Superfamily
E	IPR050254	DNA-directed RNA polymerase, subunit beta'', eukaryote	Family
E	IPR012756	DNA-directed RNA polymerase, subunit beta''	Family
E	IPR042102	RNA polymerase Rpb1, domain 3 superfamily	Homologous Superfamily
D	IPR045867	DNA-directed RNA polymerase, subunit beta-prime	Family
D	IPR034678	DNA-directed RNA polymerase subunit RpoC1	Family
D	IPR042102	RNA polymerase Rpb1, domain 3 superfamily	Homologous Superfamily
D	IPR000722	RNA polymerase, alpha subunit	Domain
D	IPR044893	RNA polymerase Rpb1, clamp domain superfamily	Homologous Superfamily
D	IPR006592	RNA polymerase, N-terminal	Domain
D	IPR007080	RNA polymerase Rpb1, domain 1	Domain
C	IPR007642	RNA polymerase Rpb2, domain 2	Domain
C	IPR015712	DNA-directed RNA polymerase, subunit 2	Family
C	IPR037033	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily	Homologous Superfamily
C	IPR042107	DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily	Homologous Superfamily
C	IPR037034	RNA polymerase Rpb2, domain 2 superfamily	Homologous Superfamily
C	IPR007120	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain	Domain
C	IPR007121	RNA polymerase, beta subunit, conserved site	Conserved Site
C	IPR007645	RNA polymerase Rpb2, domain 3	Domain
C	IPR014724	RNA polymerase Rpb2, OB-fold	Homologous Superfamily
C	IPR010243	DNA-directed RNA polymerase beta subunit, bacterial-type	Family
C	IPR007641	RNA polymerase Rpb2, domain 7	Domain
U	IPR039349	Protein PLASTID REDOX INSENSITIVE 2	Family
T	IPR014710	PpnP-like, jelly roll fold	Homologous Superfamily
T	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
T	IPR008579	(S)-ureidoglycine aminohydrolase, cupin domain	Domain
S	IPR011611	Carbohydrate kinase PfkB	Domain
S	IPR029056	Ribokinase-like	Homologous Superfamily
S	IPR050306	PfkB Carbohydrate Kinase	Family
R	IPR038958	Protein plastid transcriptionally active 7	Family
Q	IPR036615	Mur ligase, C-terminal domain superfamily	Homologous Superfamily
Q	IPR004101	Mur ligase, C-terminal	Domain
Q	IPR013221	Mur ligase, central	Domain
Q	IPR035911	MurE/MurF, N-terminal	Homologous Superfamily
Q	IPR005761	UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase	Family
Q	IPR036565	Mur-like, catalytic domain superfamily	Homologous Superfamily
O, P	IPR044182	Thioredoxin-like protein CITRX, chloroplastic	Family
O, P	IPR013766	Thioredoxin domain	Domain
O, P	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
N	IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	Homologous Superfamily
N	IPR001189	Manganese/iron superoxide dismutase	Family
N	IPR019833	Manganese/iron superoxide dismutase, binding site	Binding Site
N	IPR019832	Manganese/iron superoxide dismutase, C-terminal	Domain
N	IPR019831	Manganese/iron superoxide dismutase, N-terminal	Domain
N	IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Homologous Superfamily
M	IPR063462	PTAC6, C-terminal domain	Domain
M	IPR044710	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6	Family
M	IPR063700	PTAC6, N-terminal domain	Domain
L	IPR050600	SETD3/SETD6 methyltransferase	Family
L	IPR036464	Rubisco LSMT, substrate-binding domain superfamily	Homologous Superfamily
L	IPR046341	SET domain superfamily	Homologous Superfamily
L	IPR015353	Rubisco LSMT, substrate-binding domain	Domain
L	IPR001214	SET domain	Domain
K	IPR011611	Carbohydrate kinase PfkB	Domain
K	IPR002173	Carbohydrate/purine kinase, PfkB, conserved site	Conserved Site
K	IPR029056	Ribokinase-like	Homologous Superfamily
K	IPR050306	PfkB Carbohydrate Kinase	Family
A, B	IPR011773	DNA-directed RNA polymerase, alpha subunit	Family
A, B	IPR011262	DNA-directed RNA polymerase, insert domain	Domain
A, B	IPR011260	RNA polymerase, alpha subunit, C-terminal	Domain
A, B	IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	Domain
A, B	IPR036643	DNA-directed RNA polymerase, insert domain superfamily	Homologous Superfamily
A, B	IPR036603	RNA polymerase, RBP11-like subunit	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.