9G6V | pdb_00009g6v

Dissociated FMDV SAT2 Pentamer in complex with ultralong Fab117


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth A]e9g6vA01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
M [auth E]Beta-Caspe9g6vE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
N [auth I]Beta-Caspe9g6vI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
O [auth M]Beta-Caspe9g6vM1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
P [auth Q]Beta-Caspe9g6vQ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
C [auth 3]Beta-Caspe9g6v31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
E [auth D]Beta-Caspe9g6vD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
G [auth H]Beta-Caspe9g6vH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
K [auth P]Beta-Caspe9g6vP1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
I [auth L]Beta-Caspe9g6vL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
B [auth 2]e9g6v201 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
Q [auth C]Beta-Caspe9g6vC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
R [auth G]Beta-Caspe9g6vG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
S [auth K]Beta-Caspe9g6vK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
T [auth O]Beta-Caspe9g6vO1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
D [auth B]Beta-Caspe9g6vB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
H [auth J]Beta-Caspe9g6vJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
J [auth N]Beta-Caspe9g6vN1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
FBeta-Caspe9g6vF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: Beta-CaspECOD (v294.2)
A [auth 1]e9g6v101 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth A],
M [auth E],
N [auth I],
O [auth M],
P [auth Q]
Fab117 Heavy Chain---
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
Genome polyprotein
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
Genome polyprotein
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
Genome polyprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR059138Picornavirus capsid VP1Domain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR008739Peptidase C28, foot-and-mouth virus L-proteinaseDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR000199Peptidase C3A/C3B, picornaviralDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR001676Picornavirus capsidDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR029053Viral coat protein subunitHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR004080Foot-and-mouth disease virus VP1 coatDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR009003Peptidase S1, PA clanHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR004004Helicase/polymerase/peptidase polyprotein, Calicivirus-typeFamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR044067Picornavirales 3C/3C-like protease domainDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR033703Picornavirus/Calicivirus coat proteinDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
C [auth 3],
E [auth D],
G [auth H],
I [auth L],
K [auth P]
IPR037080Capsid protein VP4 superfamily, PicornavirusHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR059138Picornavirus capsid VP1Domain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR008739Peptidase C28, foot-and-mouth virus L-proteinaseDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR000199Peptidase C3A/C3B, picornaviralDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR001676Picornavirus capsidDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR029053Viral coat protein subunitHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR004080Foot-and-mouth disease virus VP1 coatDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR004004Helicase/polymerase/peptidase polyprotein, Calicivirus-typeFamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR044067Picornavirales 3C/3C-like protease domainDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR033703Picornavirus/Calicivirus coat proteinDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
B [auth 2],
Q [auth C],
R [auth G],
S [auth K],
T [auth O]
IPR037080Capsid protein VP4 superfamily, PicornavirusHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR059138Picornavirus capsid VP1Domain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR008739Peptidase C28, foot-and-mouth virus L-proteinaseDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR000199Peptidase C3A/C3B, picornaviralDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR001676Picornavirus capsidDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR029053Viral coat protein subunitHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR004080Foot-and-mouth disease virus VP1 coatDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR004004Helicase/polymerase/peptidase polyprotein, Calicivirus-typeFamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR044067Picornavirales 3C/3C-like protease domainDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR033703Picornavirus/Calicivirus coat proteinDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
A [auth 1],
D [auth B],
F,
H [auth J],
J [auth N]
IPR037080Capsid protein VP4 superfamily, PicornavirusHomologous Superfamily