9GAT | pdb_00009gat

CryoEM structure of the antiparallel double-stranded influenza A RNP-like particle with a 18-mer RNA.

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P [auth C]	Beta-Casp	e9gatC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
O [auth A]	Beta-Casp	e9gatA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
N [auth B]	Beta-Casp	e9gatB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
M [auth I]	Beta-Casp	e9gatI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
L [auth J]	Beta-Casp	e9gatJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
K	Beta-Casp	e9gatK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
J [auth D]	Beta-Casp	e9gatD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
A [auth L]	Beta-Casp	e9gatL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth O], C [auth P], D [auth M], E [auth N], F [auth E], B [auth O], C [auth P], D [auth M], E [auth N], F [auth E], G [auth F], H [auth G], I [auth H]	RNA (5'-P(UC)9-FAM3')	-	-	-
A [auth L], J [auth D], K, L [auth J], M [auth I], A [auth L], J [auth D], K, L [auth J], M [auth I], N [auth B], O [auth A], P [auth C]	Nucleoprotein	structural molecule activity RNA binding binding nucleic acid binding	biological process involved in interspecies interaction between organisms viral penetration into host nucleus intracellular transport of virus viral process viral life cycle transport of virus biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell other organism part host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid host cellular component cellular anatomical structure host cell other organism part host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth L], J [auth D], K, L [auth J], M [auth I], A [auth L], J [auth D], K, L [auth J], M [auth I], N [auth B], O [auth A], P [auth C]	IPR002141	Nucleoprotein, influenza virus	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.