Annotations: 9JP0

the wild-type human PRMT1 filament

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	Beta-Casp	e9jp0J1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
I	Beta-Casp	e9jp0I1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
H [auth A]	Beta-Casp	e9jp0A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
G [auth D]	Beta-Casp	e9jp0D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
F [auth H]	Beta-Casp	e9jp0H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
E [auth G]	Beta-Casp	e9jp0G1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
D [auth F]	Beta-Casp	e9jp0F1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
C	Beta-Casp	e9jp0C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
B	Beta-Casp	e9jp0B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
A [auth E]	Beta-Casp	e9jp0E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	PF13649	Methyltransferase domain (Methyltransf_25)	Methyltransferase domain	This family appears to be a methyltransferase domain.	Domain
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	PF22528	Arginine methyltransferase oligomerization subdomain (PRMT_C)	Arginine methyltransferase oligomerization subdomain	This entry represents a domain found C-terminal in protein arginine methyltransferases. This domain is involved in oligomerisation.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	Protein arginine N-methyltransferase 1	protein-containing complex binding binding GATOR1 complex binding catalytic activity, acting on a protein transferase activity, transferring one-carbon groups arginine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity protein-arginine N-methyltransferase activity cation binding protein-containing complex binding binding GATOR1 complex binding catalytic activity, acting on a protein transferase activity, transferring one-carbon groups arginine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity protein-arginine N-methyltransferase activity cation binding ion binding S-adenosyl-L-methionine binding sulfur compound binding small molecule binding RNA binding nucleic acid binding histone H4 methyltransferase activity histone methyltransferase activity histone H4R3 methyltransferase activity histone modifying activity protein binding kinase binding enzyme binding mitogen-activated protein kinase p38 binding protein kinase binding mitogen-activated protein kinase binding protein-arginine omega-N monomethyltransferase activity sequence-specific DNA binding DNA binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding methyl-CpG binding protein-arginine omega-N asymmetric methyltransferase activity identical protein binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death viral gene expression viral protein processing viral process positive regulation of protein metabolic process positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of hemoglobin biosynthetic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process hemoglobin metabolic process regulation of biosynthetic process hemoglobin biosynthetic process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process macromolecule biosynthetic process biosynthetic process regulation of hemoglobin biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction intracellular signal transduction negative regulation of cell communication cell communication negative regulation of JNK cascade regulation of intracellular signal transduction JNK cascade intracellular signaling cassette signal transduction regulation of signaling negative regulation of response to stimulus regulation of JNK cascade regulation of MAPK cascade negative regulation of signal transduction regulation of response to stimulus MAPK cascade regulation of cell communication negative regulation of MAPK cascade multicellular organismal process regulation of developmental process cellular developmental process regulation of megakaryocyte differentiation cell development megakaryocyte differentiation regulation of cell differentiation regulation of cell development multicellular organism development negative regulation of megakaryocyte differentiation cell differentiation anatomical structure development negative regulation of cell differentiation regulation of immune system process regulation of multicellular organismal process developmental process regulation of multicellular organismal development negative regulation of developmental process hemopoiesis regulation of myeloid cell differentiation negative regulation of myeloid cell differentiation myeloid cell differentiation immune system process regulation of hemopoiesis positive regulation of cell communication positive regulation of signal transduction positive regulation of TORC1 signaling positive regulation of response to stimulus positive regulation of TOR signaling regulation of TORC1 signaling TOR signaling regulation of TOR signaling positive regulation of intracellular signal transduction TORC1 signaling positive regulation of signaling cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation positive regulation of translation protein biosynthetic process post-transcriptional regulation of gene expression gene expression translation regulation of gene expression positive regulation of gene expression regulation of translation cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway regulation of transmembrane receptor protein serine/threonine kinase signaling pathway cellular response to endogenous stimulus BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway cell surface receptor signaling pathway response to endogenous stimulus regulation of cellular response to growth factor stimulus response to BMP response to growth factor transforming growth factor beta receptor superfamily signaling pathway RNA splicing RNA metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process RNA processing regulation of DNA recombination regulation of double-strand break repair regulation of cellular response to stress positive regulation of double-strand break repair via homologous recombination positive regulation of DNA repair regulation of response to stress recombinational repair regulation of nucleobase-containing compound metabolic process double-strand break repair via homologous recombination DNA repair positive regulation of DNA recombination double-strand break repair DNA recombination DNA metabolic process positive regulation of double-strand break repair regulation of DNA repair regulation of double-strand break repair via homologous recombination positive regulation of DNA metabolic process regulation of DNA metabolic process cellular response to methionine cellular response to acid chemical cellular response to nitrogen compound cellular response to amino acid stimulus response to nutrient levels response to nutrient response to oxygen-containing compound response to nitrogen compound response to amino acid cellular response to oxygen-containing compound cellular response to nutrient levels response to acid chemical cellular response to chemical stimulus response to methionine response to chemical cellular response to nutrient DNA-templated transcription regulation of RNA metabolic process regulation of RNA biosynthetic process regulation of DNA-templated transcription homeostatic process positive regulation of developmental process positive regulation of cell differentiation myeloid cell homeostasis erythrocyte homeostasis erythrocyte differentiation regulation of erythrocyte differentiation positive regulation of erythrocyte differentiation multicellular organismal-level homeostasis positive regulation of myeloid cell differentiation homeostasis of number of cells protein methylation macromolecule methylation protein alkylation methylation macromolecule modification protein modification process p38MAPK cascade positive regulation of MAPK cascade positive regulation of p38MAPK cascade regulation of p38MAPK cascade heart development cardiac muscle tissue development animal organ development tissue development striated muscle tissue development circulatory system development muscle tissue development system development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis peptidyl-arginine methylation peptidyl-amino acid modification peptidyl-arginine modification plasma membrane bounded cell projection organization cell projection organization neuron projection development nervous system development generation of neurons neurogenesis neuron differentiation neuron development chromatin organization chromatin remodeling	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome protein-containing complex catalytic complex methylosome methyltransferase complex transferase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	IPR055135	Protein arginine N-methyltransferase domain	Domain
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	IPR025799	Protein arginine N-methyltransferase	Family
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	IPR041698	Methyltransferase domain 25	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth E], B, C, D [auth F], E [auth G], A [auth E], B, C, D [auth F], E [auth G], F [auth H], G [auth D], H [auth A], I, J	: Q99873	dermatomyositis Hodgkins lymphoma lung cancer myositis rheumatoid arthritis systemic sclerosis diabetes mellitus hypothyroidism malignant colon neoplasm ovarian cancer skin basal cell carcinoma vitiligo Hashimoto thyroiditis large cell medulloblastoma medulloblastoma dermatomyositis Hodgkins lymphoma lung cancer myositis rheumatoid arthritis systemic sclerosis diabetes mellitus hypothyroidism malignant colon neoplasm ovarian cancer skin basal cell carcinoma vitiligo Hashimoto thyroiditis large cell medulloblastoma medulloblastoma psoriasis systemic lupus erythematosus

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.