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Structure Factors (CIF)
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Biological Assembly 1 (PDB - gz)
Data API
9NR3
|
pdb_00009nr3
CRBN-DDB1 in complex with GLUL-cN
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
C [auth D]
GLUL-cN
acid-ammonia (or amide) ligase activity
ammonia ligase activity
glutamine synthetase activity
catalytic activity
ligase activity, forming carbon-nitrogen bonds
ligase activity
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
acid-ammonia (or amide) ligase activity
ammonia ligase activity
glutamine synthetase activity
catalytic activity
ligase activity, forming carbon-nitrogen bonds
ligase activity
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
protein-cysteine S-acyltransferase activity
catalytic activity, acting on a protein
acyltransferase activity
acyltransferase activity, transferring groups other than amino-acyl groups
transferase activity
protein-cysteine S-palmitoyltransferase activity
S-acyltransferase activity
palmitoyltransferase activity
cation binding
metal ion binding
identical protein binding
protein binding
Less
developmental process
multicellular organismal process
blood vessel morphogenesis
tube development
angiogenesis
vasculature development
circulatory system development
anatomical structure morphogenesis
multicellular organism development
tube morphogenesis
anatomical structure formation involved in morphogenesis
anatomical structure development
blood vessel development
system development
developmental process
multicellular organismal process
blood vessel morphogenesis
tube development
angiogenesis
vasculature development
circulatory system development
anatomical structure morphogenesis
multicellular organism development
tube morphogenesis
anatomical structure formation involved in morphogenesis
anatomical structure development
blood vessel development
system development
cellular component biogenesis
ribosome biogenesis
ribonucleoprotein complex biogenesis
cellular process
cellular component organization or biogenesis
regulation of biological process
regulation of cell motility
regulation of cellular process
endothelial cell migration
biological regulation
regulation of locomotion
regulation of cell migration
regulation of endothelial cell migration
cell migration
cell motility
locomotion
cell population proliferation
regulation of sprouting angiogenesis
regulation of developmental process
regulation of vasculature development
regulation of multicellular organismal process
regulation of anatomical structure morphogenesis
regulation of multicellular organismal development
sprouting angiogenesis
regulation of angiogenesis
regulation of localization
regulation of protein localization
regulation of protein localization to nucleus
protein localization to nucleus
localization
protein localization to nucleolus
protein localization to organelle
macromolecule localization
intracellular protein localization
regulation of protein localization to nucleolus
glutamine family amino acid biosynthetic process
oxoacid metabolic process
amino acid metabolic process
organic acid metabolic process
organic acid biosynthetic process
alpha-amino acid metabolic process
carboxylic acid biosynthetic process
glutamine family amino acid metabolic process
small molecule metabolic process
glutamine metabolic process
small molecule biosynthetic process
carboxylic acid metabolic process
primary metabolic process
L-amino acid biosynthetic process
L-amino acid metabolic process
proteinogenic amino acid metabolic process
amino acid biosynthetic process
biosynthetic process
proteinogenic amino acid biosynthetic process
metabolic process
glutamine biosynthetic process
alpha-amino acid biosynthetic process
response to hexose
response to monosaccharide
response to carbohydrate
response to stimulus
response to glucose
response to chemical
response to oxygen-containing compound
cellular homeostasis
inorganic ion homeostasis
chemical homeostasis
homeostatic process
intracellular chemical homeostasis
ammonium homeostasis
intracellular ammonium homeostasis
cellular response to stimulus
cellular response to nutrient levels
response to nutrient levels
cellular response to stress
response to stress
response to starvation
cellular response to starvation
lipoprotein biosynthetic process
lipoprotein metabolic process
macromolecule biosynthetic process
protein acylation
protein lipidation
protein palmitoylation
macromolecule modification
protein metabolic process
macromolecule metabolic process
protein modification process
catabolic process
organic acid catabolic process
dicarboxylic acid catabolic process
carboxylic acid catabolic process
glutamate metabolic process
amino acid catabolic process
L-glutamate catabolic process
dicarboxylic acid metabolic process
L-amino acid catabolic process
alpha-amino acid catabolic process
proteinogenic amino acid catabolic process
small molecule catabolic process
cellular developmental process
positive regulation of biological process
cell development
regulation of cell differentiation
regulation of cell development
positive regulation of developmental process
positive regulation of cell differentiation
cell differentiation
regulation of immune system process
myeloid cell homeostasis
positive regulation of cellular process
erythrocyte homeostasis
hemopoiesis
regulation of myeloid cell differentiation
erythrocyte differentiation
regulation of erythrocyte differentiation
positive regulation of erythrocyte differentiation
multicellular organismal-level homeostasis
myeloid cell differentiation
immune system process
positive regulation of myeloid cell differentiation
regulation of hemopoiesis
homeostasis of number of cells
Less
membrane-bounded organelle
intracellular organelle
cellular anatomical structure
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
intracellular membrane-bounded organelle
extracellular exosome
extracellular vesicle
extracellular organelle
extracellular region
extracellular space
vesicle
membrane-bounded organelle
intracellular organelle
cellular anatomical structure
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
intracellular membrane-bounded organelle
extracellular exosome
extracellular vesicle
extracellular organelle
extracellular region
extracellular space
vesicle
extracellular membrane-bounded organelle
cytosol
cell periphery
plasma membrane
membrane
glial cell projection
cell projection
plasma membrane bounded cell projection
cell body
nucleus
endoplasmic reticulum
endomembrane system
Less
B
Protein cereblon
protein binding
binding
transmembrane transporter binding
cation binding
ion binding
metal ion binding
small molecule binding
regulation of localization
regulation of biological process
regulation of cellular process
transport
regulation of transport
negative regulation of monoatomic ion transport
regulation of monoatomic ion transport
monoatomic ion transmembrane transport
biological regulation
negative regulation of biological process
negative regulation of transport
regulation of monoatomic ion transmembrane transport
establishment of localization
negative regulation of transmembrane transport
transmembrane transport
regulation of localization
regulation of biological process
regulation of cellular process
transport
regulation of transport
negative regulation of monoatomic ion transport
regulation of monoatomic ion transport
monoatomic ion transmembrane transport
biological regulation
negative regulation of biological process
negative regulation of transport
regulation of monoatomic ion transmembrane transport
establishment of localization
negative regulation of transmembrane transport
transmembrane transport
localization
regulation of transmembrane transport
negative regulation of monoatomic ion transmembrane transport
negative regulation of cellular process
monoatomic ion transport
cellular process
cellular response to stimulus
positive regulation of cell communication
positive regulation of signal transduction
response to stimulus
signaling
positive regulation of biological process
regulation of signal transduction
cell communication
positive regulation of response to stimulus
positive regulation of Wnt signaling pathway
signal transduction
Wnt signaling pathway
positive regulation of cellular process
regulation of signaling
cell surface receptor signaling pathway
regulation of Wnt signaling pathway
regulation of response to stimulus
regulation of cell communication
positive regulation of signaling
positive regulation of cellular component organization
regulation of cellular component organization
protein-containing complex organization
positive regulation of cellular component biogenesis
regulation of cellular component biogenesis
cellular component organization
cellular component biogenesis
positive regulation of protein-containing complex assembly
regulation of protein-containing complex assembly
cellular component assembly
protein-containing complex assembly
cellular component organization or biogenesis
primary metabolic process
protein ubiquitination
macromolecule modification
metabolic process
protein metabolic process
macromolecule metabolic process
post-translational protein modification
protein modification process
protein modification by small protein conjugation
protein modification by small protein conjugation or removal
negative regulation of cellular component organization
negative regulation of protein-containing complex assembly
catabolic process
proteolysis involved in protein catabolic process
proteasomal protein catabolic process
protein catabolic process
proteasome-mediated ubiquitin-dependent protein catabolic process
macromolecule catabolic process
modification-dependent macromolecule catabolic process
modification-dependent protein catabolic process
proteolysis
ubiquitin-dependent protein catabolic process
behavior
multicellular organismal process
locomotory behavior
exploration behavior
locomotory exploration behavior
Less
cellular anatomical structure
membrane
intracellular anatomical structure
cytoplasm
cytosol
perinuclear region of cytoplasm
cullin-RING ubiquitin ligase complex
protein-containing complex
ubiquitin ligase complex
catalytic complex
Cul4-RING E3 ubiquitin ligase complex
transferase complex
intracellular protein-containing complex
Cul4A-RING E3 ubiquitin ligase complex
cellular anatomical structure
membrane
intracellular anatomical structure
cytoplasm
cytosol
perinuclear region of cytoplasm
cullin-RING ubiquitin ligase complex
protein-containing complex
ubiquitin ligase complex
catalytic complex
Cul4-RING E3 ubiquitin ligase complex
transferase complex
intracellular protein-containing complex
Cul4A-RING E3 ubiquitin ligase complex
membrane-bounded organelle
intracellular organelle
organelle
nucleus
intracellular membrane-bounded organelle
Less
A
DNA damage-binding protein 1
ubiquitin ligase complex scaffold activity
protein-macromolecule adaptor activity
molecular adaptor activity
DNA binding
binding
nucleic acid binding
protein-containing complex binding
protein binding
cullin family protein binding
damaged DNA binding
WD40-repeat domain binding
protein domain specific binding
cellular response to stimulus
cellular response to stress
response to stimulus
DNA damage response
response to stress
cellular process
catabolic process
proteolysis involved in protein catabolic process
proteasomal protein catabolic process
primary metabolic process
protein catabolic process
macromolecule catabolic process
proteolysis
metabolic process
cellular response to stimulus
cellular response to stress
response to stimulus
DNA damage response
response to stress
cellular process
catabolic process
proteolysis involved in protein catabolic process
proteasomal protein catabolic process
primary metabolic process
protein catabolic process
macromolecule catabolic process
proteolysis
metabolic process
protein metabolic process
macromolecule metabolic process
apoptotic process
cell death
programmed cell death
protein ubiquitination
macromolecule modification
post-translational protein modification
protein modification process
protein modification by small protein conjugation
protein modification by small protein conjugation or removal
regulation of biological process
negative regulation of reproductive process
regulation of reproductive process
reproductive process
biological regulation
negative regulation of biological process
modification-dependent macromolecule catabolic process
modification-dependent protein catabolic process
ubiquitin-dependent protein catabolic process
regulation of biosynthetic process
epigenetic programming of gene expression
regulation of cellular process
epigenetic programming in the zygotic pronuclei
epigenetic regulation of gene expression
regulation of macromolecule metabolic process
gene expression
macromolecule biosynthetic process
cellular component organization
regulation of gene expression
biosynthetic process
chromatin organization
chromatin remodeling
regulation of macromolecule biosynthetic process
cellular component organization or biogenesis
regulation of metabolic process
regulation of cell cycle phase transition
regulation of cell cycle process
cell cycle phase transition
mitotic cell cycle
regulation of mitotic cell cycle phase transition
regulation of mitotic cell cycle
mitotic cell cycle process
cell cycle
regulation of cell cycle
mitotic cell cycle phase transition
cell cycle process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
DNA repair
positive regulation of viral genome replication
positive regulation of viral process
positive regulation of biological process
viral life cycle
regulation of viral life cycle
regulation of viral process
viral genome replication
viral process
regulation of viral genome replication
developmental process
cellular developmental process
cell development
developmental process involved in reproduction
programmed cell death involved in cell development
cell differentiation
anatomical structure development
ectopic germ cell programmed cell death
nucleotide-excision repair
response to light stimulus
cellular response to environmental stimulus
cellular response to light stimulus
cellular response to radiation
response to UV
UV-damage excision repair
response to radiation
response to abiotic stimulus
cellular response to abiotic stimulus
cellular response to UV
monosaccharide metabolic process
gluconeogenesis
regulation of primary metabolic process
positive regulation of metabolic process
regulation of small molecule metabolic process
positive regulation of biosynthetic process
small molecule metabolic process
regulation of carbohydrate metabolic process
regulation of glucose metabolic process
positive regulation of cellular process
positive regulation of gluconeogenesis
carbohydrate metabolic process
small molecule biosynthetic process
carbohydrate biosynthetic process
hexose metabolic process
monosaccharide biosynthetic process
hexose biosynthetic process
positive regulation of glucose metabolic process
regulation of gluconeogenesis
positive regulation of carbohydrate metabolic process
regulation of carbohydrate biosynthetic process
positive regulation of small molecule metabolic process
glucose metabolic process
rhythmic process
circadian rhythm
regulation of circadian rhythm
negative regulation of programmed cell death
regulation of apoptotic process
regulation of programmed cell death
negative regulation of apoptotic process
negative regulation of cellular process
positive regulation of protein metabolic process
positive regulation of macromolecule metabolic process
regulation of protein metabolic process
regulation of catabolic process
positive regulation of protein catabolic process
positive regulation of catabolic process
regulation of protein catabolic process
biological process involved in interspecies interaction between organisms
biological process involved in interaction with symbiont
biological process involved in symbiotic interaction
regulation by virus of viral protein levels in host cell
positive regulation by virus of viral protein levels in host cell
regulation of biological quality
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of developmental process
negative regulation of developmental process
exit from host cell
viral release from host cell
biological process involved in interaction with host
meiotic chromosome segregation
sexual reproduction
microtubule cytoskeleton organization
membraneless organelle assembly
female gamete generation
meiotic cell cycle process
gamete generation
cellular component biogenesis
cellular component assembly
female meiotic nuclear division
meiotic nuclear division
chromosome segregation
spindle organization
organelle assembly
organelle fission
meiotic cell cycle
multicellular organismal reproductive process
meiotic spindle organization
meiotic spindle assembly
spindle assembly
nuclear division
organelle organization
nuclear chromosome segregation
microtubule-based process
cytoskeleton organization
spindle assembly involved in female meiosis
cell surface receptor signaling pathway
signaling
cell communication
signal transduction
Wnt signaling pathway
Less
extracellular exosome
membrane-bounded organelle
extracellular vesicle
cellular anatomical structure
extracellular organelle
extracellular region
organelle
extracellular space
vesicle
extracellular membrane-bounded organelle
intracellular anatomical structure
cytoplasm
intracellular organelle
membraneless organelle
extracellular exosome
membrane-bounded organelle
extracellular vesicle
cellular anatomical structure
extracellular organelle
extracellular region
organelle
extracellular space
vesicle
extracellular membrane-bounded organelle
intracellular anatomical structure
cytoplasm
intracellular organelle
membraneless organelle
intracellular membraneless organelle
chromosome
chromosome, telomeric region
chromosomal region
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
nucleolus
intracellular organelle lumen
organelle lumen
nuclear lumen
cullin-RING ubiquitin ligase complex
protein-containing complex
ubiquitin ligase complex
catalytic complex
Cul4-RING E3 ubiquitin ligase complex
transferase complex
intracellular protein-containing complex
Cul4A-RING E3 ubiquitin ligase complex
nucleoplasm
site of double-strand break
site of DNA damage
Cul4B-RING E3 ubiquitin ligase complex
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
C [auth D]
IPR027303
Glutamine synthetase, glycine-rich site
Conserved Site
C [auth D]
IPR050292
Glutamine Synthetase
Family
C [auth D]
IPR008146
Glutamine synthetase, catalytic domain
Domain
C [auth D]
IPR027302
Glutamine synthetase, N-terminal conserved site
Conserved Site
C [auth D]
IPR014746
Glutamine synthetase/guanido kinase, catalytic domain
Homologous Superfamily
C [auth D]
IPR008147
Glutamine synthetase, N-terminal domain
Domain
C [auth D]
IPR036651
Glutamine synthetase, N-terminal domain superfamily
Homologous Superfamily
B
IPR015947
PUA-like superfamily
Homologous Superfamily
B
IPR046336
Lon protease, N-terminal domain superfamily
Homologous Superfamily
B
IPR004910
Yippee/Mis18/Cereblon
Domain
B
IPR003111
Lon protease, N-terminal domain
Domain
B
IPR034750
CULT domain
Domain
A
IPR036322
WD40-repeat-containing domain superfamily
Homologous Superfamily
A
IPR004871
RSE1/DDB1/CPSF1, C-terminal
Domain
A
IPR050358
RSE1/DDB1/CPSF1
Family
A
IPR015943
WD40/YVTN repeat-like-containing domain superfamily
Homologous Superfamily
A
IPR018846
RSE1/DDB1/CPSF1, first beta-propeller
Domain
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
C [auth D]
Pharos
: 
P15104
congenital brain dysgenesis due to glutamine synthetase deficiency
hepatic encephalopathy
Brain Diseases, Metabolic, Inborn
Crohn disease
hepatic coma
psoriasis
ulcerative colitis
obesity disorder
bacterial conjunctivitis
primary cutaneous T-cell lymphoma
tenosynovitis
juvenile idiopathic arthritis
exanthem
lung adenocarcinoma
bursitis
congenital brain dysgenesis due to glutamine synthetase deficiency
hepatic encephalopathy
Brain Diseases, Metabolic, Inborn
Crohn disease
hepatic coma
psoriasis
ulcerative colitis
obesity disorder
bacterial conjunctivitis
primary cutaneous T-cell lymphoma
tenosynovitis
juvenile idiopathic arthritis
exanthem
lung adenocarcinoma
bursitis
psoriatic arthritis
eye disease
uveitis
malignant glioma
chronic beryllium disease
pulmonary fibrosis
gastric cancer
contact dermatitis
rheumatoid arthritis
glioblastoma
acquired thrombocytopenia
multiple sclerosis
adrenal cortex carcinoma
nephrotic syndrome
dacryocystitis
hepatocellular carcinoma
dermatomyositis
Sjogren syndrome
angioedema
asthma
pemphigus
atopic eczema
plasma cell myeloma
eosinophilic pneumonia
inflammatory bowel disease
autoimmune hemolytic anemia
erythema multiforme
temporal arteritis
iridocyclitis
primitive neuroectodermal tumor
esophageal adenocarcinoma
thyroiditis
keratitis
lung carcinoma
medulloblastoma
congenital adrenal hyperplasia
gastric carcinoma
miliary tuberculosis
rosacea
gout
acute lymphoblastic leukemia
musculoskeletal system disease
cutaneous lupus erythematosus
schizophrenia
adrenocortical insufficiency
depressive disorder
allergic bronchopulmonary aspergillosis
ankylosing spondylitis
osteosarcoma
skin disease
astrocytic tumor
pilocytic astrocytoma
Down syndrome
sympathetic ophthalmia
idiopathic acute eosinophilic pneumonia
atypical teratoid rhabdoid tumor
pneumocystosis
epicondylitis
inherited aplastic anemia
autoimmune thrombocytopenic purpura
tendinitis
iritis
blepharoconjunctivitis
large cell medulloblastoma
breast cancer
extrinsic allergic alveolitis
malignant ependymoma
pulmonary eosinophilia
rheumatic heart disease
Gaucher disease
corneal ulcer
sarcoidosis
granuloma annulare
Addison disease
mycosis fungoides
seborrheic dermatitis
alcohol withdrawal
dermatitis herpetiformis
sinusitis
allergic rhinitis
aspiration pneumonitis
ovarian cancer
Diamond-Blackfan anemia
Stevens-Johnson syndrome
Hodgkins lymphoma
atopic conjunctivitis
synovitis
autoimmune disease
polymyalgia rheumatica
systemic lupus erythematosus
intellectual disability
Less
B
Pharos
: 
Q96SW2
intellectual disability, autosomal recessive 2
plasma cell myeloma
3p- syndrome
intellectual disability
toxic or drug-related embryofetopathy
central nervous system malformation
Erythema nodosum leprosum
mantle cell lymphoma
non-small cell lung carcinoma
follicular lymphoma
large cell medulloblastoma
marginal zone lymphoma
osteosarcoma
POEMS syndrome
attention deficit hyperactivity disorder, inattentive type
intellectual disability, autosomal recessive 2
plasma cell myeloma
3p- syndrome
intellectual disability
toxic or drug-related embryofetopathy
central nervous system malformation
Erythema nodosum leprosum
mantle cell lymphoma
non-small cell lung carcinoma
follicular lymphoma
large cell medulloblastoma
marginal zone lymphoma
osteosarcoma
POEMS syndrome
attention deficit hyperactivity disorder, inattentive type
lung adenocarcinoma
myelodysplastic syndrome
ovarian cancer
Less
A
Pharos
: 
Q16531
Disease Exacerbation
gastric cancer
lung cancer
xeroderma pigmentosum
gastric neoplasm
drug-induced liver injury
hereditary diffuse gastric adenocarcinoma
psoriasis
Protein Modification Annotation
Modified Residue(s)
Chain
Residue(s)
Description
C [auth D]
SNN
Parent Component:
ASN
RESID
: 
AA0302
,
AA0593
PSI-MOD
:  L-aspartimide
MOD:00307
, 2-(2-aminosuccinimidyl)pentanedioic acid (Asn)
MOD:01940
, 2-(2-aminosuccinimidyl)pentanedioic acid (Asp)
MOD:01941
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