AF_AFQ08857F1

Computed structure model of Platelet glycoprotein 4

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Platelet glycoprotein 4	amyloid-beta binding binding peptide binding protein binding signaling receptor binding Toll-like receptor binding protein-containing complex binding long-chain fatty acid transmembrane transporter activity lipid transmembrane transporter activity fatty acid transmembrane transporter activity oleate transmembrane transporter activity transporter activity monocarboxylic acid transmembrane transporter activity carboxylic acid transmembrane transporter activity amyloid-beta binding binding peptide binding protein binding signaling receptor binding Toll-like receptor binding protein-containing complex binding long-chain fatty acid transmembrane transporter activity lipid transmembrane transporter activity fatty acid transmembrane transporter activity oleate transmembrane transporter activity transporter activity monocarboxylic acid transmembrane transporter activity carboxylic acid transmembrane transporter activity transmembrane transporter activity lipoprotein particle binding protein-lipid complex binding high-density lipoprotein particle binding transforming growth factor beta binding growth factor binding cytokine binding molecular transducer activity signaling receptor activity thrombospondin receptor activity short-chain fatty acid transmembrane transporter activity lipoprotein particle receptor activity low-density lipoprotein particle receptor activity cargo receptor activity low-density lipoprotein particle binding lipid binding scavenger receptor activity lipoteichoic acid immune receptor activity pattern recognition receptor activity oxidised low-density lipoprotein particle receptor activity fatty acid binding organic acid binding long-chain fatty acid binding oleic acid binding ion binding anion binding carboxylic acid binding monocarboxylic acid binding small molecule binding	regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of nitric oxide metabolic process positive regulation of nitric oxide biosynthetic process regulation of metabolic process positive regulation of cellular process multicellular organismal process catabolic process amyloid-beta metabolic process amyloid-beta clearance by cellular catabolic process amyloid-beta clearance cellular response to stimulus cellular response to low-density lipoprotein particle stimulus cellular response to oxidised low-density lipoprotein particle stimulus response to stimulus response to endogenous stimulus response to chemical response to lipoprotein particle cellular response to lipoprotein particle stimulus regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of cell adhesion cell-substrate adhesion positive regulation of cell-matrix adhesion cell adhesion cell-matrix adhesion positive regulation of cell-substrate adhesion regulation of cell-matrix adhesion carboxylic acid transport transport lipid localization lipid transport establishment of localization organic acid transport localization monocarboxylic acid transport fatty acid transport macromolecule localization long-chain fatty acid transport positive regulation of protein localization to plasma membrane regulation of localization cellular localization regulation of protein localization intracellular protein localization regulation of protein localization to membrane positive regulation of protein localization to cell periphery protein localization to cell periphery protein localization to plasma membrane positive regulation of protein localization to membrane regulation of protein localization to cell periphery localization within membrane protein localization to membrane regulation of cellular localization positive regulation of protein localization regulation of protein localization to plasma membrane cholesterol transport sterol transport organic hydroxy compound transport system process digestion intestinal absorption digestive system process import into cell positive regulation of cellular component organization regulation of cellular component organization vesicle-mediated transport cellular component organization positive regulation of endocytosis phagocytosis cellular component organization or biogenesis regulation of endocytosis regulation of transport regulation of phagocytosis regulation of vesicle-mediated transport positive regulation of phagocytosis positive regulation of transport endocytosis positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway toll-like receptor signaling pathway regulation of signal transduction response to biotic stimulus cell communication immune response-activating signaling pathway positive regulation of immune response regulation of immune system process signal transduction positive regulation of immune system process innate immune response-activating signaling pathway immune response response to other organism regulation of innate immune response response to external stimulus regulation of response to stimulus defense response to other organism regulation of pattern recognition receptor signaling pathway positive regulation of defense response activation of innate immune response regulation of immune response regulation of toll-like receptor signaling pathway activation of immune response regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus signaling positive regulation of response to stimulus positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of response to stress response to stress innate immune response response to external biotic stimulus regulation of signaling positive regulation of innate immune response defense response defense response to symbiont immune system process regulation of cell communication response to oxidative stress cellular response to chemical stimulus cellular response to stress cellular response to oxidative stress cellular response to chemical stress intestinal lipid absorption intestinal cholesterol absorption lipid digestion cellular response to lipoteichoic acid response to oxygen-containing compound response to lipoteichoic acid cellular response to molecule of bacterial origin cellular response to oxygen-containing compound cellular response to biotic stimulus response to bacterium response to molecule of bacterial origin lipid import into cell long-chain fatty acid import into cell regulation of body fluid levels positive regulation of coagulation positive regulation of blood coagulation regulation of response to wounding regulation of coagulation coagulation regulation of multicellular organismal process positive regulation of hemostasis regulation of biological quality response to wounding regulation of hemostasis positive regulation of response to wounding wound healing regulation of blood coagulation hemostasis blood coagulation positive regulation of wound healing regulation of wound healing positive regulation of multicellular organismal process regulation of immune effector process positive regulation of macromolecule biosynthetic process positive regulation of myeloid leukocyte cytokine production involved in immune response cytokine production regulation of cytokine production positive regulation of immune effector process positive regulation of macromolecule metabolic process myeloid leukocyte cytokine production cytokine production involved in immune response production of molecular mediator of immune response regulation of cytokine production involved in immune response regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process immune effector process regulation of gene expression regulation of macrophage cytokine production positive regulation of gene expression positive regulation of cytokine production involved in immune response positive regulation of production of molecular mediator of immune response regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of production of molecular mediator of immune response positive regulation of cytokine production positive regulation of macrophage cytokine production macrophage cytokine production negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process apoptotic cell clearance plasma lipoprotein particle clearance oxidised low-density lipoprotein particle clearance regulation of plasma lipoprotein particle levels phagocytosis, recognition cell recognition positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of signaling response to hydroperoxide cellular response to hydroperoxide positive regulation of ERK1 and ERK2 cascade positive regulation of MAPK cascade regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade lipoprotein particle mediated signaling low-density lipoprotein particle mediated signaling sensory perception of chemical stimulus sensory perception nervous system process sensory perception of taste cellular response to bacterial lipoprotein response to diacyl bacterial lipopeptide cellular response to diacyl bacterial lipopeptide response to bacterial lipoprotein response to bacterial lipopeptide cellular response to bacterial lipopeptide regulation of generation of precursor metabolites and energy positive regulation of glycogen metabolic process regulation of small molecule metabolic process small molecule metabolic process carbohydrate biosynthetic process hexose metabolic process positive regulation of glucose metabolic process positive regulation of glycogen biosynthetic process energy reserve metabolic process positive regulation of carbohydrate metabolic process regulation of glycogen metabolic process monosaccharide metabolic process regulation of glycogen biosynthetic process glucan biosynthetic process energy derivation by oxidation of organic compounds regulation of glucan biosynthetic process regulation of polysaccharide metabolic process polysaccharide metabolic process glucan metabolic process regulation of carbohydrate metabolic process regulation of glucose metabolic process carbohydrate metabolic process polysaccharide biosynthetic process glycogen metabolic process generation of precursor metabolites and energy glycogen biosynthetic process regulation of polysaccharide biosynthetic process regulation of carbohydrate biosynthetic process positive regulation of small molecule metabolic process glucose metabolic process protein metabolic process supramolecular fiber organization amyloid fibril formation behavior eating behavior feeding behavior fatty acid metabolic process long-chain fatty acid metabolic process oxoacid metabolic process carboxylic acid metabolic process monocarboxylic acid metabolic process lipid metabolic process multicellular organismal-level homeostasis homeostatic process energy homeostasis regulation of action potential action potential regulation of membrane potential developmental process regulation of developmental process blood microparticle formation positive regulation of developmental process anatomical structure morphogenesis regulation of blood microparticle formation anatomical structure formation involved in morphogenesis anatomical structure development positive regulation of blood microparticle formation regulation of interleukin-12 production interleukin-12 production positive regulation of interleukin-12 production cellular developmental process macrophage derived foam cell differentiation regulation of cell differentiation foam cell differentiation positive regulation of cell differentiation cell differentiation regulation of macrophage derived foam cell differentiation positive regulation of macrophage derived foam cell differentiation reactive oxygen species metabolic process positive regulation of reactive oxygen species metabolic process regulation of reactive oxygen species metabolic process response to stilbenoid regulation of NLRP3 inflammasome complex assembly positive regulation of NLRP3 inflammasome complex assembly cellular component biogenesis cellular component assembly inflammasome-mediated signaling pathway canonical inflammasome complex assembly positive regulation of pattern recognition receptor signaling pathway positive regulation of inflammasome-mediated signaling pathway regulation of inflammasome-mediated signaling pathway NLRP3 inflammasome complex assembly inflammatory response cytoplasmic pattern recognition receptor signaling pathway intracellular receptor signaling pathway regulation of cytoplasmic pattern recognition receptor signaling pathway regulation of protein-containing complex assembly positive regulation of protein-containing complex assembly protein-containing complex assembly protein-containing complex organization positive regulation of cellular component biogenesis regulation of cellular component biogenesis cell surface receptor signaling pathway neutral lipid metabolic process regulation of triglyceride metabolic process positive regulation of triglyceride metabolic process regulation of lipid metabolic process triglyceride metabolic process positive regulation of lipid metabolic process glycerolipid metabolic process acylglycerol metabolic process reactive oxygen species biosynthetic process positive regulation of reactive oxygen species biosynthetic process regulation of reactive oxygen species biosynthetic process regulation of systemic arterial blood pressure circulatory system process regulation of blood pressure negative regulation of systemic arterial blood pressure blood circulation negative regulation of blood pressure response to lipid response to fatty acid angiogenesis regulation of vasculature development multicellular organism development tube morphogenesis regulation of anatomical structure morphogenesis system development blood vessel development regulation of multicellular organismal development blood vessel morphogenesis tube development negative regulation of blood vessel morphogenesis negative regulation of developmental process negative regulation of angiogenesis vasculature development circulatory system development negative regulation of vasculature development regulation of angiogenesis negative regulation of multicellular organismal process negative regulation of gene expression regulation of tumor necrosis factor production positive regulation of tumor necrosis factor superfamily cytokine production tumor necrosis factor superfamily cytokine production positive regulation of tumor necrosis factor production tumor necrosis factor production regulation of tumor necrosis factor superfamily cytokine production cellular response to nitrogen compound response to nitrogen compound cellular response to amyloid-beta response to amyloid-beta acylglycerol transport triglyceride transport negative regulation of protein transport establishment of protein localization negative regulation of nucleocytoplasmic transport nucleocytoplasmic transport nuclear transport negative regulation of intracellular protein transport regulation of protein localization to nucleus negative regulation of transport negative regulation of protein import into nucleus intercellular transport import into nucleus regulation of protein import into nucleus establishment of localization in cell protein import into nucleus regulation of intracellular transport negative regulation of protein localization negative regulation of intracellular transport regulation of establishment of protein localization negative regulation of establishment of protein localization intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus regulation of protein transport negative regulation of protein localization to nucleus establishment of protein localization to organelle protein transport protein localization to organelle regulation of intracellular protein transport intracellular protein transport receptor internalization receptor-mediated endocytosis vascular transport vascular process in circulatory system lipid transport across blood-brain barrier transport across blood-brain barrier plasma lipoprotein particle organization protein-lipid complex organization chylomicron assembly plasma lipoprotein particle assembly protein-lipid complex assembly interleukin-1 production regulation of interleukin-1 beta production positive regulation of interleukin-1 beta production positive regulation of interleukin-1 production regulation of interleukin-1 production interleukin-1 beta production lipoprotein transport lipoprotein localization nitric oxide-cGMP-mediated signaling cholesterol import response to linoleic acid positive regulation of cytosolic calcium ion concentration detoxification regulation of cellular response to stress regulation of cellular response to oxidative stress response to superoxide cellular oxidant detoxification cellular response to oxygen radical cellular response to reactive oxygen species regulation of response to oxidative stress cellular detoxification regulation of superoxide metabolic process response to reactive oxygen species regulation of removal of superoxide radicals response to toxic substance superoxide metabolic process removal of superoxide radicals regulation of response to reactive oxygen species cellular response to superoxide cellular response to toxic substance response to oxygen radical positive regulation of membrane invagination regulation of phagocytosis, engulfment membrane invagination plasma membrane invagination membrane organization phagocytosis, engulfment positive regulation of phagocytosis, engulfment regulation of membrane invagination interleukin-6 production positive regulation of interleukin-6 production regulation of interleukin-6 production cellular response to lipopolysaccharide response to lipopolysaccharide cellular response to lipid cholesterol storage lipid storage positive regulation of lipid localization regulation of lipid storage regulation of lipid localization positive regulation of cholesterol storage nutrient storage regulation of cholesterol storage positive regulation of lipid storage adaptive thermogenesis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis positive regulation of cold-induced thermogenesis response to mechanical stimulus response to abiotic stimulus positive regulation of angiogenesis positive regulation of vasculature development carboxylic acid transmembrane transport fatty acid transmembrane transport import across plasma membrane transmembrane transport long-chain fatty acid import across plasma membrane lipid modification fatty acid oxidation lipid oxidation short-chain fatty acid transport low-density lipoprotein particle clearance defense response to Gram-positive bacterium defense response to bacterium	protein-containing complex signaling receptor complex cell surface cellular anatomical structure membrane microdomain cell periphery membrane raft plasma membrane raft membrane plasma membrane plasma membrane region caveola brush border membrane cluster of actin-based cell projections protein-containing complex signaling receptor complex cell surface cellular anatomical structure membrane microdomain cell periphery membrane raft plasma membrane raft membrane plasma membrane plasma membrane region caveola brush border membrane cluster of actin-based cell projections plasma membrane bounded cell projection brush border cell projection apical part of cell apical plasma membrane cell projection membrane external side of plasma membrane side of membrane sarcolemma membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002159	CD36 family	Family
A	IPR005428	CD36/scavenger receptor class B member 1	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.