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CHLOROPEROXIDASE T/BENZOATE COMPLEX
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1A7U PDB ENTRY 1A7U
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.8 1.8 M AMMONIUM SULFATE PH 7.8., SMALL AMOUNTS OF SOLID SODIUM BENZOATE
Crystal Properties Matthews coefficient Solvent content 2.65 56.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 124.87 α = 90 b = 124.87 β = 90 c = 124.87 γ = 90
Symmetry Space Group P 21 3
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 IMAGE PLATE MARRESEARCH MIRROR 1997-01-19 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MPG/DESY, HAMBURG BEAMLINE BW6 MPG/DESY, HAMBURG BW6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 28 98.9 0.076 20 4.7 84499 13.49
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.67 97.9 0.18 9 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1A7U 1.6 90 84499 4229 98.9 0.149 0.152 0.1491 0.171 RANDOM 13.25
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 30.4 p_staggered_tor 11.9 p_planar_tor 4.1 p_scbond_it 1.69 p_mcangle_it 1.57 p_scangle_it 1.42 p_mcbond_it 1.07 p_multtor_nbd 0.25 p_singtor_nbd 0.169 p_chiral_restr 0.131
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 30.4 p_staggered_tor 11.9 p_planar_tor 4.1 p_scbond_it 1.69 p_mcangle_it 1.57 p_scangle_it 1.42 p_mcbond_it 1.07 p_multtor_nbd 0.25 p_singtor_nbd 0.169 p_chiral_restr 0.131 p_xyhbond_nbd 0.093 p_planar_d 0.031 p_angle_d 0.026 p_plane_restr 0.022 p_bond_d 0.012 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4290 Nucleic Acid Atoms Solvent Atoms 671 Heterogen Atoms 25
Software Software Software Name Purpose CCP4 model building REFMAC refinement DENZO data reduction SCALEPACK data scaling CCP4 phasing