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COMPLEX BETWEEN HUMAN T-CELL RECEPTOR, VIRAL PEPTIDE (TAX), AND HLA-A 0201
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1HHK PDB ENTRIES 1HHK, 1BEC CHAIN 1934.4 experimental model PDB 1BEC PDB ENTRIES 1HHK, 1BEC CHAIN 1934.4
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 CRYSTALLIZED FROM 10% PEG 8000, 100 MM MGACETATE, 50 MM NACACODYLATE, PH 6.5
Crystal Properties Matthews coefficient Solvent content 2.9 56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 229.3 α = 90 b = 49.5 β = 89.6 c = 96 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM MIRRORS 1996-05-05 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE A1 CHESS A1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.6 12 95 0.11 0.11 7 3.1 29279 -3.5 48.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.6 2.69 82.9 0.246 0.246 3.9 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT, HEAVY ATOM DERIVATIVES, ITERATIVE REAL-SPACE AVERAGING THROUGHOUT PDB ENTRIES 1HHK, 1BEC CHAIN 1934.4 2.6 6 29279 3006 94.9 0.245 0.245 0.2317 0.32 0.2977 SHELLS 42.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -6 6 6
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 27.8 x_scangle_it 8.92 x_scbond_it 5.97 x_mcangle_it 5.47 x_mcbond_it 3.5 x_angle_deg 1.6 x_improper_angle_d 1.39 x_bond_d 0.007 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 27.8 x_scangle_it 8.92 x_scbond_it 5.97 x_mcangle_it 5.47 x_mcbond_it 3.5 x_angle_deg 1.6 x_improper_angle_d 1.39 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5668 Nucleic Acid Atoms Solvent Atoms 37 Heterogen Atoms 6
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling VECREF model building X-PLOR model building X-PLOR refinement VECREF phasing X-PLOR phasing