KRINGLE 2 DOMAIN OF HUMAN PLASMINOGEN: NMR SOLUTION STRUCTURE OF TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID (AMCHA) COMPLEX
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | COSY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 2 | NOESY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 3 | TOCSY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 4 | 3D-NOESY HSQC | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 5 | 3D-TOCSY HSQC | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 6 | HNCA | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 7 | HN(CO)CA | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| 8 | HCC(CO)NH | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX500 | 500 |
| 2 | Bruker | DRX600 | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DISTANCE GEOMETRY, DYNAMIC SIMULATED ANNEALING | CHARMM | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | TOTAL ENERGY, RAMACHANDRAN PLOT, LEAST RESTRAINT VIOLATION |
| Conformers Calculated Total Number | 150 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (n/a) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CHARMM | 23.2 | BROOKS ET AL., J. COMPUT. CHEM. 4, 187-217 (1983) |
| 2 | structure solution | X-PLOR | ||
