1B2I
KRINGLE 2 DOMAIN OF HUMAN PLASMINOGEN: NMR SOLUTION STRUCTURE OF TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID (AMCHA) COMPLEX
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | COSY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
2 | NOESY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
3 | TOCSY | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
4 | 3D-NOESY HSQC | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
5 | 3D-TOCSY HSQC | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
6 | HNCA | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
7 | HN(CO)CA | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 | ||
8 | HCC(CO)NH | 90% H2O/10% D2O | SEE PAPER | 5.1 | AMBIENT | 310 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX500 | 500 |
2 | Bruker | DRX600 | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DISTANCE GEOMETRY, DYNAMIC SIMULATED ANNEALING | CHARMM |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | TOTAL ENERGY, RAMACHANDRAN PLOT, LEAST RESTRAINT VIOLATION |
Conformers Calculated Total Number | 150 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (n/a) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | CHARMM | 23.2 | BROOKS ET AL., J. COMPUT. CHEM. 4, 187-217 (1983) |
2 | structure solution | X-PLOR |