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RICIN A CHAIN (RECOMBINANT) COMPLEX WITH PTEROIC ACID
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RTC PDB ENTRY 1RTC
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.9 pH 8.9
Crystal Properties Matthews coefficient Solvent content 2.25 37.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.992 α = 90 b = 64.366 β = 107.98 c = 49.442 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 AREA DETECTOR SDMS 1995-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.23 20 96 0.0612 11.3 6.2 10999
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.23 2.4 78 0.135 4.2 2.9
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1RTC 2.3 5 9321 99.4 0.18 0.18 0.1765
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.27 x_angle_deg 3.243 x_scbond_it 2 x_scangle_it 2 x_mcbond_it 1.5 x_mcangle_it 1.5 x_improper_angle_d 1.431 x_bond_d 0.014 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.27 x_angle_deg 3.243 x_scbond_it 2 x_scangle_it 2 x_mcbond_it 1.5 x_mcangle_it 1.5 x_improper_angle_d 1.431 x_bond_d 0.014 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2122 Nucleic Acid Atoms Solvent Atoms 41 Heterogen Atoms 23
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement UCSD-system data reduction UCSD-system data scaling X-PLOR phasing