1BTE
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE TYPE II ACTIVIN RECEPTOR
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments | ||||
---|---|---|---|---|
ID | Method | pH | Temperature | Details |
1 | 4.5 | 100 MM SODIUM ACETATE, PH 4.5, 5% PEG 8000, 0.5M NACL |
Crystal Properties | |
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Matthews coefficient | Solvent content |
2.4 | 42 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 71.63 | α = 90 |
b = 71.63 | β = 90 |
c = 37.38 | γ = 120 |
Symmetry | |
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Space Group | P 3 |
Diffraction
Diffraction Experiment | ||||||||||||||
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ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray | 100 | CCD | ADSC | 1998-01-15 | M | SINGLE WAVELENGTH |
Radiation Source | |||||
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ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
1 | SYNCHROTRON | ALS BEAMLINE 5.0.2 | ALS | 5.0.2 |
Data Collection
Overall | |||||||||||||||||||
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ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Sym I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot | ||||||||
1 | 1.5 | 50 | 83.9 | 0.034 | 11.6 | 4.2 | 30005 | 18.1 |
Highest Resolution Shell | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | R-Sym I (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) | |||||||||||
1 | 1.5 | 1.54 | 37.3 | 0.295 | 0.3 | 2.9 |
Refinement
Statistics | |||||||||||||||||||
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Diffraction ID | Structure Solution Method | Resolution (High) | Resolution (Low) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Work (Depositor) | R-Free (Depositor) | R-Free Selection Details | Mean Isotropic B | |||||||||
X-RAY DIFFRACTION | MIRAS | 1.5 | 20 | 30005 | 1500 | 83.9 | 0.181 | 0.222 | RANDOM | 23.6 |
RMS Deviations | |
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Key | Refinement Restraint Deviation |
p_transverse_tor | 20.6 |
p_staggered_tor | 16.5 |
p_planar_tor | 5.5 |
p_scangle_it | 2.989 |
p_mcangle_it | 2.678 |
p_scbond_it | 2.007 |
p_mcbond_it | 1.613 |
p_multtor_nbd | 0.256 |
p_singtor_nbd | 0.171 |
p_chiral_restr | 0.141 |
Non-Hydrogen Atoms Used in Refinement | |
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Non-Hydrogen Atoms | Number |
Protein Atoms | 1484 |
Nucleic Acid Atoms | |
Solvent Atoms | 202 |
Heterogen Atoms | 56 |
Software
Software | |
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Software Name | Purpose |
MOSFLM | data reduction |
SCALA | data scaling |
MLPHARE | phasing |
ARP | model building |
DM | model building |
REFMAC | refinement |
CCP4 | data scaling |
ARP/wARP | model building |
DM | phasing |