1BWX
THE SOLUTION STRUCTURE OF HUMAN PARATHYROID HORMONE FRAGMENT 1-39, NMR, 10 STRUCTURES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | NOESY | 10% D2O/90% H2O | 320 mM | 5.8 | 1 atm | 298 | ||
2 | COSY | 10% D2O/90% H2O | 320 mM | 5.8 | 1 atm | 298 | ||
3 | TOCSY | 10% D2O/90% H2O | 320 mM | 5.8 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX600 | 600 |
NMR Refinement | ||
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Method | Details | Software |
SIMULATED ANNEALING, RESTRAINED MOLECULAR DYNAMICS | THE STRUCTURE CALCULATION FOLLOWED STANDARD PROCEDURES EMPLOYING A HYBRID DISTANCE GEOMETRY MOLECULAR DYNAMICS APPROACH WITH SIMULATED ANNEALING REFINEMENT AND SUBSEQUENT ENERGY MINIMIZATION. FOR THE REFINEMENT THE DIELECTRIC CONSTANT WAS CHANGED TO 4. STRUCTURE PARAMETERS WERE EXTRACTED FROM THE STANDARD FILES PARALLHDG.PRO AND TOPALLHDG.PRO OF X-PLOR 3.1. IN EACH ROUND OF THE STRUCTURE CALCULATION 30 STRUCTURES WERE CALCULATED. OF THE 30 STRUCTURES RESULTING FROM THE FINAL ROUND OF STRUCTURE CALCULATION, THOSE 10 STRUCTURES THAT SHOWED THE LOWEST TOTAL ENERGY VALUES WERE SELECTED FOR FURTHER CHARACTERIZATION. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | ENERGY, AGREEMENT WITH EXPERIMENTAL DATA |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 10 |
Additional NMR Experimental Information | |
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Details | THE DISTANCE RESTRAINTS USED FOR STRUCTURE CALCULATION WERE OBTAINED FROM TWO-DIMENSIONAL HOMONUCLEAR 1H- NOESY SPECTRA. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | BRUNGER |
2 | structure solution | NDEE | ||
3 | structure solution | X-PLOR |