1DET

RIBONUCLEASE T1 CARBOXYMETHYLATED AT GLU 58 IN COMPLEX WITH 2'GMP


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14.5pH 4.5
Crystal Properties
Matthews coefficientSolvent content
2.6152.9

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.69α = 90
b = 88.69β = 90
c = 88.69γ = 90
Symmetry
Space GroupI 2 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray288IMAGE PLATERIGAKU1995-05-16M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONPHOTON FACTORY BEAMLINE BL-6APhoton FactoryBL-6A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.895.90.0576.5104591

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION1.881103549632.2
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor26
p_staggered_tor17.7
p_scangle_it3.995
p_planar_tor2.9
p_scbond_it2.547
p_mcangle_it2.424
p_mcbond_it1.424
p_xyhbond_nbd0.234
p_multtor_nbd0.196
p_chiral_restr0.191
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor26
p_staggered_tor17.7
p_scangle_it3.995
p_planar_tor2.9
p_scbond_it2.547
p_mcangle_it2.424
p_mcbond_it1.424
p_xyhbond_nbd0.234
p_multtor_nbd0.196
p_chiral_restr0.191
p_singtor_nbd0.18
p_planar_d0.055
p_angle_d0.045
p_bond_d0.019
p_plane_restr0.015
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms783
Nucleic Acid Atoms24
Solvent Atoms81
Heterogen Atoms4

Software

Software
Software NamePurpose
WEISdata collection
PROLSQrefinement
WEISdata reduction