1IGR

Type 1 Insulin-like growth factor receptor (DOMAINS 1-3)


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.5PROTEIN WAS CRYSTALLIZED FROM 2.0 M AMMONIUM SULFATE, 100 MM HEPES, PH 7.5
Crystal Properties
Matthews coefficientSolvent content
4.2766

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 77.39α = 90
b = 99.72β = 90
c = 120.29γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray103IMAGE PLATERIGAKU RAXIS IVMIRRORS1996-11-15MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEMACSCIENCE M18X

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.61599.60.06418.74.126963
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.6997.40.5193.33.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMIRASTHROUGHOUT2.672269632693970.2370.304RANDOM52.3
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
8.122-13.10.976
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor28.1
p_staggered_tor24.1
p_scangle_it9.046
p_scbond_it7.903
p_planar_tor6
p_mcangle_it5.407
p_mcbond_it3.721
p_multtor_nbd0.296
p_xyhbond_nbd0.226
p_singtor_nbd0.219
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor28.1
p_staggered_tor24.1
p_scangle_it9.046
p_scbond_it7.903
p_planar_tor6
p_mcangle_it5.407
p_mcbond_it3.721
p_multtor_nbd0.296
p_xyhbond_nbd0.226
p_singtor_nbd0.219
p_chiral_restr0.149
p_planar_d0.051
p_angle_d0.048
p_plane_restr0.0384
p_bond_d0.017
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3686
Nucleic Acid Atoms
Solvent Atoms48
Heterogen Atoms166

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PROTEINmodel building
MLPHAREphasing
DMmodel building
REFMACrefinement
PROTEINphasing
DMphasing