1ILY
Solution Structure of Ribosomal Protein L18 of Thermus thermophilus
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 0.8 mM L18 U-15N,13C; 50 mM phosphate buffer; 200 mM LiCl | 90% H2O/10% D2O | 50 mM KH2PO4, 200 mM LiCl | 5.9 | 1 atm | 303 | |
2 | 2D NOESY | 0.8 mM L18 U-15N,13C; 50 mM phosphate buffer; 200 mM LiCl | 90% H2O/10% D2O | 50 mM KH2PO4, 200 mM LiCl | 5.9 | 1 atm | 303 | |
3 | 3D_15N-separated_NOESY | 1.3 mM L18 U-15N; 50 mM phosphate buffer; 200 mM LiCl | 90% H2O/10% D2O | 50 mM KH2PO4, 200 mM LiCl | 5.9 | 1 atm | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Varian | INOVA | 800 |
3 | Bruker | AVANCE | 500 |
4 | Bruker | AVANCE | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing, torsion angle dynamics | structures are based on 1925 NOE-derived distance restraints, 125 backbone dihedral angle restraints, 12 chi-1 angle restraints, 68 distance restraints from hydrogen bonds | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 27 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | Bruker | |
2 | processing | NMRPipe | Delaglio | |
3 | data analysis | ANSIG | 3.3 | Kraulis |
4 | data analysis | ANSIG | for Windows | Helgstrand |
5 | structure solution | CNS | 1.0 | Brunger |
6 | refinement | CNS | 1.0 | Brunger |