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Crystal Structure of PaaI from Thermus thermophilus HB8
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 7.5 295 PEG 400, magnesium chloride, HEPES-Na, pH 7.5, MICROBATCH, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.16 42.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.877 α = 90 b = 57.877 β = 90 c = 139.607 γ = 90
Symmetry Space Group P 43 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS V 2001-10-12 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL45PX 0.97950, 0.97945, 1.02000 SPring-8 BL45PX
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 30 100 0.072 0.07 5.9 14 26981 26981 16.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.79 100 0.182 0.176 4.2 14.2 3841
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.7 30 26981 26981 1349 100 0.182 0.182 0.181 0.1828 0.193 0.1872 RANDOM 18
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.09 -0.09 0.18
RMS Deviations Key Refinement Restraint Deviation c_angle_deg 1.1 c_bond_d 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1733 Nucleic Acid Atoms Solvent Atoms 200 Heterogen Atoms 2
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MLPHARE phasing CNS refinement CCP4 data scaling