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NMR Solution Structure of Oxidized Cytochrome c-553 from Bacillus pasteurii
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer 90%H2O+10%D2O;
100% D2O 10 mM phosphate buffer 7.5 Ambient 288 2 HNHA 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer 90%H2O+10%D2O;
100% D2O 10 mM phosphate buffer 7.5 Ambient 288 3 1D NOE 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer 90%H2O+10%D2O;
100% D2O 10 mM phosphate buffer 7.5 Ambient 288
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800 2 Bruker AVANCE 700 3 Bruker AVANCE 600
NMR Refinement Method Details Software torsion angle dynamics,
restrained energy minimization PSEUDOCONTACT SHIFTS WERE INCLUDED AS CONSTRAINTS BY
MEANS OF MODIFIED DYANA AND SANDER MODULES
(PSEUDODYANA, PSEUDOREM) (BANCI ET AL., 1997) XwinNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 400 Conformers Submitted Total Number 30
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR 2.6 Bruker 2 data analysis XEASY 1.3.13 Xia 3 structure solution DYANA 1.5 Guentert 4 refinement Amber 5.0 Kollman