☰ Navigation Tabs
Mycobacterium tuberculosis FprA in complex with NADPH
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QLT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 277 PEG4000, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.54 51.64
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.507 α = 90 b = 89.466 β = 90 c = 161.658 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2001-07-31 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 1.0 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 20 98.1 0.053 0.053 9.1 3.2 275836 275836
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.25 1.31 93.8 0.304 0.304 2.5 2.3 38255
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1QLT 1.25 40 273390 273390 1350 98.53 0.12565 0.12565 0.12565 0.142 RANDOM 12.756
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.14 -0.38 0.53
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.933 r_sphericity_free 11.373 r_dihedral_angle_1_deg 4.882 r_sphericity_bonded 4.663 r_scangle_it 4.586 r_scbond_it 3.045 r_mcangle_it 2.192 r_angle_refined_deg 1.684 r_mcbond_it 1.437 r_rigid_bond_restr 1.358
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.933 r_sphericity_free 11.373 r_dihedral_angle_1_deg 4.882 r_sphericity_bonded 4.663 r_scangle_it 4.586 r_scbond_it 3.045 r_mcangle_it 2.192 r_angle_refined_deg 1.684 r_mcbond_it 1.437 r_rigid_bond_restr 1.358 r_angle_other_deg 1.355 r_nbtor_other 0.322 r_nbd_refined 0.243 r_symmetry_vdw_other 0.221 r_symmetry_hbond_refined 0.221 r_symmetry_vdw_refined 0.2 r_nbd_other 0.199 r_xyhbond_nbd_refined 0.197 r_xyhbond_nbd_other 0.16 r_chiral_restr 0.109 r_bond_refined_d 0.014 r_gen_planes_refined 0.009 r_gen_planes_other 0.009 r_bond_other_d 0.001 r_symmetry_hbond_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 14068 Nucleic Acid Atoms Solvent Atoms 4266 Heterogen Atoms 403
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement CCP4 data scaling