1M2N
Sir2 homologues (D102G/F159A/R170A) mutant-2'-O-acetyl ADP ribose complex
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments | ||||
---|---|---|---|---|
ID | Method | pH | Temperature | Details |
1 | EVAPORATION | 7 | 291 | PEG 8000, HEPES, pH 7.0, EVAPORATION, temperature 291K |
Crystal Properties | |
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Matthews coefficient | Solvent content |
3.64 | 66.24 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 84.72 | α = 90 |
b = 84.72 | β = 90 |
c = 193.087 | γ = 120 |
Symmetry | |
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Space Group | P 31 2 1 |
Diffraction
Diffraction Experiment | ||||||||||||||
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ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray | 93 | IMAGE PLATE | RIGAKU RAXIS IV | M | SINGLE WAVELENGTH |
Radiation Source | |||||
---|---|---|---|---|---|
ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
1 | ROTATING ANODE | RIGAKU |
Data Collection
Refinement
Statistics | |||||||||||||||||||
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Diffraction ID | Structure Solution Method | Cross Validation method | Resolution (High) | Resolution (Low) | Number Reflections (All) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (All) | R-Factor (Observed) | R-Work (Depositor) | R-Free (Depositor) | R-Free Selection Details | Mean Isotropic B | |||||
X-RAY DIFFRACTION | MOLECULAR REPLACEMENT | THROUGHOUT | 2.6 | 19.91 | 25461 | 19681 | 1345 | 77.6 | 0.228 | 0.228 | 0.228 | 0.308 | RANDOM | 50.7 |
Temperature Factor Modeling | ||||||
---|---|---|---|---|---|---|
Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[2][2] | Anisotropic B[3][3] | |||
-1.11 | 4.54 | -0.22 | 1.33 |
RMS Deviations | |
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Key | Refinement Restraint Deviation |
c_dihedral_angle_d | 22.6 |
c_scangle_it | 2.76 |
c_mcangle_it | 2.34 |
c_scbond_it | 1.76 |
c_angle_deg | 1.5 |
c_mcbond_it | 1.35 |
c_improper_angle_d | 0.97 |
c_bond_d | 0.007 |
c_bond_d_na | |
c_bond_d_prot |
Non-Hydrogen Atoms Used in Refinement | |
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Non-Hydrogen Atoms | Number |
Protein Atoms | 3850 |
Nucleic Acid Atoms | |
Solvent Atoms | 158 |
Heterogen Atoms | 80 |
Software
Software | |
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Software Name | Purpose |
CNS | refinement |