1MOQ

ISOMERASE DOMAIN OF GLUCOSAMINE 6-PHOSPHATE SYNTHASE COMPLEXED WITH GLUCOSAMINE 6-PHOSPHATE


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1MORPDB ENTRY 1MOR

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16pH 6.0
Crystal Properties
Matthews coefficientSolvent content
4.371

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 143.7α = 90
b = 143.7β = 90
c = 173.6γ = 120
Symmetry
Space GroupH 3 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCHCYLINDRICAL MIRROR1997-02-14M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X11EMBL/DESY, HAMBURGX11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.573099.50.0439.26.595543-318.5
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.571.696.20.2085.73.3

Refinement

Statistics
Diffraction IDStructure Solution MethodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONDIFFERENCE FOURIERPDB ENTRY 1MOR1.57109494399.70.18524.5
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30.4
p_staggered_tor15.2
p_scangle_it10.4
p_scbond_it7.8
p_mcangle_it4.8
p_mcbond_it3.6
p_planar_tor2.9
p_chiral_restr0.14
p_multtor_nbd0.14
p_singtor_nbd0.105
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor30.4
p_staggered_tor15.2
p_scangle_it10.4
p_scbond_it7.8
p_mcangle_it4.8
p_mcbond_it3.6
p_planar_tor2.9
p_chiral_restr0.14
p_multtor_nbd0.14
p_singtor_nbd0.105
p_planar_d0.032
p_angle_d0.028
p_plane_restr0.015
p_bond_d0.014
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_xyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2820
Nucleic Acid Atoms
Solvent Atoms416
Heterogen Atoms62

Software

Software
Software NamePurpose
CCP4model building
PROLSQrefinement
DENZOdata reduction
SCALEPACKdata scaling
CCP4phasing