1MOT
NMR Structure Of Extended Second Transmembrane Domain Of Glycine Receptor alpha1 Subunit in SDS Micelles
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
2 | 2D TOCSY | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
3 | 3D_15N-separated_NOESY | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
4 | COSY | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
5 | 15N T1 | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
6 | 15N T2 | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 | |
7 | 15N Het-NOE | SDS concentration: 300 mM Peptide concentration: 2 mM | 90% H2O/10% D2O | 300 mM SDS concentration | 5.0 | 1 atm | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | DRX | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing | the structures are based on a total of 187 restraints, 169 are NOE-derived distance constraints,18 distance restraints from hydrogen bonds | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using standard 2D homonuclear and triple-resonance NMR spectroscopy. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.851 | Brunger, A.T. |
2 | refinement | X-PLOR | 3.851 | Brunger, A.T. |