X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP290Sodium Formate 2.7M, VAPOR DIFFUSION, HANGING DROP, temperature 290K
2VAPOR DIFFUSION, HANGING DROP290Sodium Formate 2.7M, VAPOR DIFFUSION, HANGING DROP, temperature 290K

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 181.393α = 90
b = 183.001β = 90
c = 184.124γ = 90
Symmetry
Space GroupF 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMirrors2000-11-10MMAD
21x-ray100CCDADSC QUANTUM 4Mirrors2001-04-10MSINGLE WAVELENGTH
1,21
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM140.97947, 0.97939, 0.96863ESRFBM14
2SYNCHROTRONSRS BEAMLINE PX14.20.97800SRSPX14.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
1,21.8200.05321.33.3714029639.7
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1,21.81.840.4383.27

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.821.22129459686497.260.177920.177920.176360.20687RANDOM17.225
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.060.050.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.394
r_scangle_it8.608
r_dihedral_angle_1_deg8.048
r_scbond_it6.804
r_mcangle_it4.601
r_mcbond_it3.304
r_angle_refined_deg1.244
r_angle_other_deg0.744
r_xyhbond_nbd_other0.236
r_nbd_refined0.224
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg20.394
r_scangle_it8.608
r_dihedral_angle_1_deg8.048
r_scbond_it6.804
r_mcangle_it4.601
r_mcbond_it3.304
r_angle_refined_deg1.244
r_angle_other_deg0.744
r_xyhbond_nbd_other0.236
r_nbd_refined0.224
r_nbd_other0.203
r_symmetry_hbond_refined0.202
r_symmetry_vdw_other0.191
r_symmetry_vdw_refined0.155
r_xyhbond_nbd_refined0.154
r_chiral_restr0.108
r_gen_planes_refined0.013
r_bond_refined_d0.012
r_gen_planes_other0.007
r_bond_other_d
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9523
Nucleic Acid Atoms
Solvent Atoms694
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SHELXDphasing
REFMACrefinement