1NMW
Solution structure of the PPIase domain of human Pin1
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 0.6-0.8mM Pin1(PPIase) U-15N,13C; 50mM phosphate buffer, 1mM DTT, 5mM EDTA, 50-100mM Na sulphate | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 | |
2 | 3D_13C-separated_NOESY | 0.6-0.8mM Pin1(PPIase) U-15N,13C; 50mM phosphate buffer, 1mM DTT, 5mM EDTA, 50-100mM Na sulphate | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 | |
3 | 3D_15N-separated_NOESY | 0.6-0.8mM Pin1(PPIase) U-15N,13C;50mM Tris/HCl buffer, 1mM DTT, 5mM EDTA | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 | |
4 | HNHA | 0.6-0.8mM Pin1(PPIase) U-15N,13C; 50mM phosphate buffer, 1mM DTT, 5mM EDTA, 50-100mM Na sulphate | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 | |
5 | 2D NOESY | 0.8mM Pin1(PPIase); 50mM phosphate buffer, 1mM DTT, 5mM EDTA, 50-100mM Na sulphate | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 | |
6 | 2D TOCSY | 0.8mM Pin1(PPIase); 50mM phosphate buffer, 1mM DTT, 5mM EDTA, 50-100mM Na sulphate | 90% H2O/10% D2O | n.c. | 6.6 | ambient | 300 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 7 (lowest energy) |
Additional NMR Experimental Information | |
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Details | Hydrogen bonds were extracted from HSQC spectra in D2O |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 3.2 | Bruker |
2 | data analysis | AURELIA | 2.8.11 | Bruker |
3 | collection | VNMR | 6.18 | Varian |
4 | refinement | CNS | 1.0 | Bruenger |
5 | data analysis | NDEE | 1.2 | Spin-Up |