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SHIKIMATE DEHYDROGENASE AroE COMPLEXED WITH NADP+
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.7 293 1.6M ammonium sulfate, 100mM cacodylate buffer, pH 5.7, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.42 48.83
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 110.524 α = 90 b = 140.019 β = 122.07 c = 102.712 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2000-02-12 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 0.87 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 38.92 93.11 0.048 18.8 5.3 210686 196162 4 2 19.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.53 86.7 0.766 1.56 2.9 9101
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 1.5 38.92 196162 196162 19515 93.11 0.13594 0.13594 0.1323 0.1643 0.16869 RANDOM 14.02
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.01 -0.01 0.01 -0.01
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 5.741 r_dihedral_angle_1_deg 5.538 r_scbond_it 4.032 r_mcangle_it 2.547 r_angle_other_deg 2.063 r_angle_refined_deg 1.776 r_mcbond_it 1.747 r_symmetry_vdw_other 0.338 r_nbd_other 0.25 r_nbd_refined 0.225
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 5.741 r_dihedral_angle_1_deg 5.538 r_scbond_it 4.032 r_mcangle_it 2.547 r_angle_other_deg 2.063 r_angle_refined_deg 1.776 r_mcbond_it 1.747 r_symmetry_vdw_other 0.338 r_nbd_other 0.25 r_nbd_refined 0.225 r_xyhbond_nbd_refined 0.188 r_symmetry_vdw_refined 0.162 r_symmetry_hbond_refined 0.154 r_chiral_restr 0.137 r_nbtor_other 0.106 r_bond_refined_d 0.018 r_gen_planes_refined 0.009 r_gen_planes_other 0.006 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8236 Nucleic Acid Atoms Solvent Atoms 1333 Heterogen Atoms 270
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling CCP4 data scaling MLPHARE phasing SHELXD phasing DM phasing SOLVE phasing