1OZU

Crystal Structure of Familial ALS Mutant S134N of human Cu,Zn Superoxide Dismutase (CuZnSOD) to 1.3A resolution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7298Ammonium sulfate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystal Properties
Matthews coefficientSolvent content
1.8934.28

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 40.086α = 90
b = 56.457β = 90
c = 105.35γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirrors2002-04-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X8C1.1000NSLSX8C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.352.797.90.0523.74.625850758507-312.6
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.31.3887.10.4982.865121

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB Entry 1AZV1.352.75550255502294598.610.178060.178060.177220.19339RANDOM13.417
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.440.340.1
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg19.138
r_dihedral_angle_1_deg4.643
r_scangle_it3.586
r_sphericity_free2.292
r_scbond_it2.258
r_mcangle_it1.762
r_sphericity_bonded1.698
r_angle_refined_deg1.541
r_rigid_bond_restr1.179
r_mcbond_it1.021
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg19.138
r_dihedral_angle_1_deg4.643
r_scangle_it3.586
r_sphericity_free2.292
r_scbond_it2.258
r_mcangle_it1.762
r_sphericity_bonded1.698
r_angle_refined_deg1.541
r_rigid_bond_restr1.179
r_mcbond_it1.021
r_angle_other_deg0.854
r_nbd_refined0.311
r_chiral_restr0.282
r_symmetry_vdw_refined0.265
r_symmetry_vdw_other0.231
r_nbd_other0.225
r_symmetry_hbond_refined0.174
r_xyhbond_nbd_refined0.166
r_bond_refined_d0.01
r_gen_planes_refined0.005
r_gen_planes_other0.003
r_bond_other_d0.001
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_hbond_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1997
Nucleic Acid Atoms
Solvent Atoms247
Heterogen Atoms13

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
AMoREphasing