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Flpe W330F mutant-DNA Holliday Junction Complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1M6X Flpe-DNA complex, pdb. 1M6X
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 277 PEG 5KMME, Hepes, xylitol, sodium chloride, calcium chloride, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.91 57.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.76 α = 90 b = 116.715 β = 97.64 c = 142.053 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD ADSC QUANTUM 4 2001-03-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C 0.9 APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 22 96.1 0.043 68765 68765 -3 42.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.8 90.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT Flpe-DNA complex, pdb. 1M6X 2.7 21.98 70806 64397 6513 90.8 0.236 0.2289 0.275 0.2681 RANDOM 79
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -15.62 1.42 16.55 -0.93
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 20.2 c_scangle_it 4.72 c_scbond_it 3.68 c_mcangle_it 2.38 c_mcbond_it 1.33 c_angle_deg 1.2 c_improper_angle_d 0.98 c_bond_d 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13181 Nucleic Acid Atoms 2619 Solvent Atoms 266 Heterogen Atoms 4
Software Software Software Name Purpose CNS refinement DENZO data reduction SCALEPACK data scaling CNS phasing