1PNM
PENICILLIN ACYLASE HAS A SINGLE-AMINO-ACID CATALYTIC CENTRE
X-RAY DIFFRACTION
Crystallization
Crystal Properties | |
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Matthews coefficient | Solvent content |
2.55 | 51.84 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 52.12 | α = 100.2 |
b = 65.08 | β = 111.44 |
c = 76.3 | γ = 105.81 |
Symmetry | |
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Space Group | P 1 |
Diffraction
Diffraction Experiment | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol | |||||
1 | 1 | x-ray |
Refinement
Statistics | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Diffraction ID | Structure Solution Method | Resolution (High) | Resolution (Low) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (Observed) | R-Work | R-Free | Mean Isotropic B | |||||||||
X-RAY DIFFRACTION | 2.5 | 8 | 21315 | 0.1629 | 0.222 |
Temperature Factor Modeling | ||||||
---|---|---|---|---|---|---|
Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] | |
RMS Deviations | |
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Key | Refinement Restraint Deviation |
p_orthonormal_tor | 25.664 |
p_staggered_tor | 17.492 |
p_scangle_it | 5.143 |
p_scbond_it | 3.374 |
p_mcangle_it | 2.839 |
p_planar_tor | 2.7 |
p_mcbond_it | 1.719 |
p_multtor_nbd | 0.232 |
p_singtor_nbd | 0.159 |
p_xhyhbond_nbd | 0.152 |
Non-Hydrogen Atoms Used in Refinement | |
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Non-Hydrogen Atoms | Number |
Protein Atoms | 5960 |
Nucleic Acid Atoms | |
Solvent Atoms | 469 |
Heterogen Atoms | 11 |
Software
Software | |
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Software Name | Purpose |
PROLSQ | refinement |