X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.9lithium sulfate, ammonium sulfate, pH 5.9, VAPOR DIFFUSION, HANGING DROP
Crystal Properties
Matthews coefficientSolvent content
4.4472.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.889α = 90
b = 79.889β = 90
c = 171.891γ = 90
Symmetry
Space GroupP 41 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray93IMAGE PLATERIGAKU RAXIS IV2001-09-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU1.54

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.620971784617310
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.62.6997.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.610167041617685797.380.259240.259240.257530.29216RANDOM25.151
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.160.16-0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.152
r_mcangle_it3.405
r_scangle_it2.804
r_mcbond_it1.876
r_scbond_it1.66
r_angle_refined_deg1.238
r_nbd_refined0.177
r_symmetry_vdw_refined0.144
r_xyhbond_nbd_refined0.094
r_chiral_restr0.054
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.152
r_mcangle_it3.405
r_scangle_it2.804
r_mcbond_it1.876
r_scbond_it1.66
r_angle_refined_deg1.238
r_nbd_refined0.177
r_symmetry_vdw_refined0.144
r_xyhbond_nbd_refined0.094
r_chiral_restr0.054
r_symmetry_hbond_refined0.052
r_bond_refined_d0.006
r_gen_planes_refined0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2032
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms77

Software

Software
Software NamePurpose
REFMACrefinement
d*TREKdata scaling
AMoREphasing