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Latent LytM at 1.3 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.7 291 170 mM ammonium sulfate, 25.5% (w/v) PEG 8K, 15% (v/v) glycerol, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 1.9 35.31
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 45.332 α = 90 b = 53.232 β = 104.02 c = 51.603 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M MAD 2 1 100
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.2 1.28335 BESSY 14.2 2 ROTATING ANODE RIGAKU 1.54179
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.3 15 94.05 0.062 0.062 6.4 2.3 54733 54733 12.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.3 1.37 91.1 0.174 0.174 3.5 2.2 7719
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.3 15 51945 51945 2781 93.76 0.16362 0.16362 0.16271 0.18084 0.2099 RANDOM 12.723
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.59 -0.44 -0.25 -0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.262 r_scangle_it 3.046 r_scbond_it 2.008 r_mcangle_it 1.534 r_angle_refined_deg 1.317 r_mcbond_it 0.827 r_angle_other_deg 0.775 r_nbd_other 0.257 r_symmetry_vdw_other 0.244 r_symmetry_hbond_refined 0.207
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.262 r_scangle_it 3.046 r_scbond_it 2.008 r_mcangle_it 1.534 r_angle_refined_deg 1.317 r_mcbond_it 0.827 r_angle_other_deg 0.775 r_nbd_other 0.257 r_symmetry_vdw_other 0.244 r_symmetry_hbond_refined 0.207 r_nbd_refined 0.204 r_symmetry_vdw_refined 0.186 r_xyhbond_nbd_refined 0.133 r_nbtor_other 0.086 r_chiral_restr 0.083 r_gen_planes_other 0.012 r_bond_refined_d 0.01 r_gen_planes_refined 0.009 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1822 Nucleic Acid Atoms Solvent Atoms 354 Heterogen Atoms 1
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction CCP4 data scaling MLPHARE phasing