☰ Navigation Tabs
Crystal structure of S. aureus methionine aminopeptidase in complex with a ketoheterocycle inhibitor 119
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 MICROBATCH 5.5 294 PEG 3350, Bis-Tris, ammonium acetate, pH 5.5, microbatch, temperature 294K
Crystal Properties Matthews coefficient Solvent content 2.3 46.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.947 α = 90 b = 76.916 β = 104.79 c = 41.651 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 IMAGE PLATE MARRESEARCH 2001-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE OTHER 1.57
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.68 20 97.9 0.041 22.2 3 29072 28461 3 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.68 1.77 93.1 0.143 6.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.68 20 28461 26439 1400 97.88 0.17122 0.16972 0.1834 0.19948 0.2125 RANDOM 12.52
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 0.45 -0.65 0.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.848 r_dihedral_angle_3_deg 16.749 r_dihedral_angle_1_deg 6.839 r_scangle_it 4.196 r_mcangle_it 2.752 r_scbond_it 2.68 r_mcbond_it 1.793 r_angle_refined_deg 0.995 r_angle_other_deg 0.576 r_nbd_refined 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 16.848 r_dihedral_angle_3_deg 16.749 r_dihedral_angle_1_deg 6.839 r_scangle_it 4.196 r_mcangle_it 2.752 r_scbond_it 2.68 r_mcbond_it 1.793 r_angle_refined_deg 0.995 r_angle_other_deg 0.576 r_nbd_refined 0.298 r_symmetry_hbond_refined 0.262 r_nbd_other 0.214 r_xyhbond_nbd_refined 0.19 r_symmetry_vdw_other 0.147 r_symmetry_vdw_refined 0.111 r_chiral_restr 0.052 r_bond_refined_d 0.006 r_gen_planes_refined 0.003 r_gen_planes_other 0.002 r_bond_other_d r_dihedral_angle_4_deg r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1904 Nucleic Acid Atoms Solvent Atoms 261 Heterogen Atoms 17
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing