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Crystal Structure of IscA (MERCURY DERIVATIVE)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 298 dibasic ammonium phosphate, imidazole, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 8.00
Crystal Properties Matthews coefficient Solvent content 2.75 55.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.337 α = 90 b = 55.337 β = 90 c = 159.835 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR591
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 500 99.4 0.063 38 5.6 12243 -3 44.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.4 99.1 0.457 5.5 5.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIR THROUGHOUT 2.3 27.22 11110 580 95.2 0.231 0.229 0.263 RANDOM 43.78
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.11 -0.06 -0.11 0.17
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.515 r_scangle_it 4.01 r_scbond_it 2.306 r_mcangle_it 1.756 r_angle_refined_deg 1.514 r_mcbond_it 0.919 r_symmetry_hbond_refined 0.249 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.198 r_symmetry_vdw_refined 0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.515 r_scangle_it 4.01 r_scbond_it 2.306 r_mcangle_it 1.756 r_angle_refined_deg 1.514 r_mcbond_it 0.919 r_symmetry_hbond_refined 0.249 r_nbd_refined 0.219 r_xyhbond_nbd_refined 0.198 r_symmetry_vdw_refined 0.18 r_chiral_restr 0.091 r_bond_refined_d 0.014 r_gen_planes_refined 0.006 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1470 Nucleic Acid Atoms Solvent Atoms 85 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement MAR345 data collection SCALEPACK data scaling CNS phasing