1T4J

Allosteric Inhibition of Protein Tyrosine Phosphatase 1B


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION277VAPOR DIFFUSION, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
3.665.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 88.544α = 90
b = 88.544β = 90
c = 104.828γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU RAXIS IVmirrors2002-04-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU RU3001.54

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.71094.60.113216741313655.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-Work (Depositor)R-Work (DCC)R-Free (Depositor)R-Free (DCC)R-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.710118251182564894.620.228570.227640.220.245930.24RANDOM31.262
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.01-0.01-0.010.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.766
r_mcangle_it3.948
r_scangle_it3.915
r_scbond_it2.395
r_mcbond_it2.252
r_angle_refined_deg1.295
r_nbd_refined0.197
r_symmetry_vdw_refined0.11
r_xyhbond_nbd_refined0.109
r_chiral_restr0.075
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2304
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms41

Software

Software
Software NamePurpose
REFMACrefinement
d*TREKdata scaling
AMoREphasing