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Crystal structure of human adipocyte fatty acid binding protein in complex with a carboxylic acid ligand
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 PEG2000, DMSO, TRIS, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.08 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 72.05 α = 90 b = 53.045 β = 90 c = 31.782 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV 2000-11-05 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 25 93.2 0.058 55.9 4.3 8190
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.07 67.2 0.165 7 577
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2 15 7757 7757 368 93.78 0.19151 0.18848 0.1947 0.25651 RANDOM 20.363
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.7 -1.28 1.98
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.496 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 13.772 r_dihedral_angle_1_deg 6.012 r_scangle_it 2.79 r_scbond_it 1.672 r_angle_refined_deg 1.288 r_mcangle_it 1.192 r_mcbond_it 0.764 r_nbtor_refined 0.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.496 r_dihedral_angle_4_deg 18.525 r_dihedral_angle_3_deg 13.772 r_dihedral_angle_1_deg 6.012 r_scangle_it 2.79 r_scbond_it 1.672 r_angle_refined_deg 1.288 r_mcangle_it 1.192 r_mcbond_it 0.764 r_nbtor_refined 0.3 r_symmetry_vdw_refined 0.285 r_nbd_refined 0.189 r_xyhbond_nbd_refined 0.165 r_symmetry_hbond_refined 0.126 r_chiral_restr 0.075 r_bond_refined_d 0.01 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1022 Nucleic Acid Atoms Solvent Atoms 174 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing