1UPN
COMPLEX OF ECHOVIRUS TYPE 12 WITH DOMAINS 3 AND 4 OF ITS RECEPTOR DECAY ACCELERATING FACTOR (CD55) BY CRYO ELECTRON MICROSCOPY AT 16 A
ELECTRON MICROSCOPY
Sample |
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ECHOVIRUS TYPE 12 |
Specimen Preparation | |
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Sample Aggregation State | PARTICLE |
Vitrification Instrument | |
Cryogen Name | ETHANE |
Sample Vitrification Details | LIQUID ETHANE |
Staining Type | NEGATIVE |
Staining Material | Ammonium Molybdate |
Staining Details |
3D Reconstruction | |
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Reconstruction Method | SINGLE PARTICLE |
Number of Particles | 903 |
Reported Resolution (Å) | 16 |
Resolution Method | FSC 0.5 CUT-OFF |
Other Details | MAP BROUGHT TO P23 CRYSTAL WITH UNIT CELL DIMENSIONS OF 599.375 599.375 599.375 90.00 90.00 90.00. MODEL FOR EV11 DOCKED ONTO EV12 EM DENSITY. 0.5 A G ... |
Refinement Type | |
Symmetry Type | POINT |
Point Symmetry | I |
Map-Model Fitting and Refinement | |||||
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Id | 1 (1UPN) | ||||
Refinement Space | REAL | ||||
Refinement Protocol | OTHER | ||||
Refinement Target | Cross-correlation coefficient | ||||
Overall B Value | |||||
Fitting Procedure | |||||
Details | REFINEMENT PROTOCOL--X-RAY |
Data Acquisition | |||||||||
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Detector Type | KODAK SO-163 FILM | ||||||||
Electron Dose (electrons/Å**2) |
Imaging Experiment | 1 |
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Date of Experiment | 2002-07-15 |
Temperature (Kelvin) | 108 |
Microscope Model | JEOL 2000EXII |
Minimum Defocus (nm) | 300 |
Maximum Defocus (nm) | 2000 |
Minimum Tilt Angle (degrees) | |
Maximum Tilt Angle (degrees) | |
Nominal CS | 3.4 |
Imaging Mode | BRIGHT FIELD |
Specimen Holder Model | |
Nominal Magnification | 30000 |
Calibrated Magnification | 29200 |
Source | LAB6 |
Acceleration Voltage (kV) | 120 |
Imaging Details | PARTICLES SELECTED WITH X3D |
EM Software | ||
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Task | Software Package | Version |
RECONSTRUCTION | MRC IMAGE PROCESSING PACKAGE |