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MabA from Mycobacterium tuberculosis
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.6 PIPES PH 6.6, CSCL 300 MM, PEG 3000 12%
Crystal Properties Matthews coefficient Solvent content 1.8 32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.274 α = 90 b = 116.991 β = 122.05 c = 51.977 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 2002-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.49 59 92.9 0.026 2.5 60917
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.49 1.53 70.9 0.411 0.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.49 59 60967 1250 92.9 0.199 0.199 0.228 0.2624 RANDOM 12
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.06 -0.21 -1.23 2.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.561 r_scangle_it 2.711 r_scbond_it 1.66 r_mcangle_it 1.279 r_angle_refined_deg 1.244 r_angle_other_deg 1.002 r_mcbond_it 0.716 r_symmetry_vdw_refined 0.51 r_metal_ion_refined 0.407 r_nbd_other 0.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.561 r_scangle_it 2.711 r_scbond_it 1.66 r_mcangle_it 1.279 r_angle_refined_deg 1.244 r_angle_other_deg 1.002 r_mcbond_it 0.716 r_symmetry_vdw_refined 0.51 r_metal_ion_refined 0.407 r_nbd_other 0.24 r_symmetry_vdw_other 0.221 r_symmetry_hbond_refined 0.21 r_nbd_refined 0.2 r_xyhbond_nbd_refined 0.14 r_nbtor_other 0.118 r_chiral_restr 0.096 r_bond_refined_d 0.01 r_gen_planes_refined 0.004 r_bond_other_d 0.002 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3115 Nucleic Acid Atoms Solvent Atoms 424 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling