1V4R
Solution structure of Streptmycal repressor TraR
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 2mM TraR U-15N,13C; 50mM phosphate buffer Na, 100mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM | 6.5 | 1 atm | 303 | |
2 | 3D_13C-separated_NOESY | 2mM TraR U-15N,13C; 50mM phosphate buffer Na, 100mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM | 6.5 | 1 atm | 303 | |
3 | 3D_15N-separated_NOESY | 2mM TraR U-15N,13C; 50mM phosphate buffer Na, 100mM NaCl; 90% H2O, 10% D2O | 90% H2O/10% D2O | 100mM | 6.5 | 1 atm | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics, matrix relaxation, torsion angle dynamics | ANSIG |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 120 |
Conformers Submitted Total Number | 10 |
Representative Model | 4 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | data analysis | ANSIG | 3.3 | Kraulis, P |
2 | processing | Azara | 2.7 | Boucher, W. |
3 | structure solution | X-PLOR | 3.1 | |
4 | collection | XwinNMR | 2.6 | Bruker |
5 | refinement | X-PLOR | 3.1 |