1V88
Solution Structure of the Pleckstrin Homology Domain of Oxysterol-Binding Protein-Related Protein 8 (KIAA1451 Protein)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1.21mM Pleckstrin Homology domain U-13C, 15N; 20mM Phosphate buffer Na; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O | 120mM | 6.0 | ambient | 298 | |
2 | 3D_13C-separated_NOESY | 1.21mM Pleckstrin Homology domain U-13C, 15N; 20mM Phosphate buffer Na; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O | 120mM | 6.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations, target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.6 | Bruker |
2 | processing | NMRPipe | 20020425 | Delaglio, F. |
3 | data analysis | NMRView | 5.0.4 | Johnson, B. A. |
4 | data analysis | KUJIRA | 0.854 | Kobayashi, N. |
5 | structure solution | CYANA | 1.0.7 | Guentert, P. |
6 | refinement | CYANA | 1.0.7 | Guentert, P. |