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Crystal structure of an uncharacterized B. cereus protein
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8.5 295 0.1M Tris-HCl, 0.2M Sodium Acetate, 0.5 Sodium Chloride, 30% PEG 4000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.8 55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 141.681 α = 90 b = 141.681 β = 90 c = 141.681 γ = 90
Symmetry Space Group P 43 3 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2004-06-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 5ID-B 0.97916 APS 5ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 30 100 0.079 30 9.7 22225 22225 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.38 100 0.485 4.95 9.3 2171
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT 2.3 25 21033 21033 1132 99.98 0.17422 0.17422 0.17115 0.1702 0.23175 0.2317 RANDOM 38.879
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.498 r_dihedral_angle_3_deg 15.424 r_dihedral_angle_4_deg 14.464 r_dihedral_angle_1_deg 6.019 r_scangle_it 3.111 r_scbond_it 2.104 r_mcangle_it 1.244 r_angle_refined_deg 1.18 r_mcbond_it 0.786 r_nbtor_refined 0.301
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.498 r_dihedral_angle_3_deg 15.424 r_dihedral_angle_4_deg 14.464 r_dihedral_angle_1_deg 6.019 r_scangle_it 3.111 r_scbond_it 2.104 r_mcangle_it 1.244 r_angle_refined_deg 1.18 r_mcbond_it 0.786 r_nbtor_refined 0.301 r_nbd_refined 0.187 r_symmetry_vdw_refined 0.163 r_xyhbond_nbd_refined 0.158 r_symmetry_hbond_refined 0.153 r_chiral_restr 0.078 r_bond_refined_d 0.011 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2790 Nucleic Acid Atoms Solvent Atoms 359 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SHARP phasing