1XF7
High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | DQF-COSY | 5mM WT1-F3[EK] | 90% H2O/10% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
2 | 2D NOESY | 5mM WT1-F3[EK] | 90% H2O/10% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
3 | 2D TOCSY | 5mM WT1-F3[EK] | 90% H2O/10% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
4 | 3D-TOCSY-NOESY | 5mM WT1-F3[EK] | 90% H2O/10% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
5 | 2D-ROESY | 5mM WT1-F3[EK] | 90% H2O/10% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
6 | DQF-COSY | 5mM WT1-F3[EK] | 100% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
7 | 2D NOESY | 5mM WT1-F3[EK] | 100% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 | |
8 | 2D TOCSY | 5mM WT1-F3[EK] | 100% D2O | 50mM D11-TRIS-HCL, 5.5mM ZnCl2 | 6.1 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | VXRS | 500 |
2 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DISTANCE GEOMETRY/SIMULATED ANNEALING FOLLOWED BY RESTRAINED MOLECULAR DYNAMICS | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 40 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | VNMR | 4.3-5.3 | Varian, Inc. |
2 | structure solution | DGII | Standalone | Havel, T.F. |
3 | refinement | X-PLOR | 3.1 | Brunger, A.T. |