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Solution Structure of Bacillus subtilis Protein yqbG: The Northeast Structural Genomics Consortium Target SR215
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 GFT (4,3)D HNNCabCb 0.94 mM, NMR Buffer 6.5, 5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, pH 6.5 95% H2O/5% D2O 6.5 ambient 298 2 GFT (4,3)D CabCb(CO)NHN 0.94 mM, NMR Buffer 6.5, 5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, pH 6.5 95% H2O/5% D2O 6.5 ambient 298 3 GFT (4,3)D HabCab(CO)NHN 0.94 mM, NMR Buffer 6.5, 5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, pH 6.5 95% H2O/5% D2O 6.5 ambient 298 4 Simultaneous heteronuclear resolved [1H,1H]-NOESY 0.94 mM, NMR Buffer 6.5, 5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, pH 6.5 95% H2O/5% D2O 6.5 ambient 298 5 GFT (4,3)D HCCH 0.94 mM, NMR Buffer 6.5, 5% D2O, 0.02% NaN3, 10mM DTT, 5mM CaCl2, 100mM NaCl, 20mM MES, pH 6.5 95% H2O/5% D2O 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 750
NMR Refinement Method Details Software torsion angle dynamics NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations,target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.3 Delaglio, F. 2 data analysis XEASY 1.3.1.3 Bartels, C. 3 structure solution DYANA 1.5 Guentert, P. 4 refinement DYANA 1.5 Guentert, P. 5 data analysis AutoAssign 1.13.2 Zimmerman, D.E. 6 data analysis AutoStructure 2.0.0 Huang, Y.J. 7 data analysis CYANA 1.0.5 Guentert, P.