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Identification of a disulfide switch in BsSco, a member of the Sco family of cytochrome c oxidase assembly proteins
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 PEG5K MME, CdCl2, CaCl2, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 3.12 60.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.033 α = 90 b = 68.033 β = 90 c = 191.733 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2003-06-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X12B 0.97960 NSLS X12B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 64.55 57817 54348
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.7 1.76 0.94
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.702 37.2 57817 51554 2771 94.6 0.24088 0.23824 0.2479 0.28935 0.2886 RANDOM 26.669
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.35 0.17 0.35 -0.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.748 r_scangle_it 5.922 r_scbond_it 4.009 r_mcangle_it 2.708 r_angle_refined_deg 2.388 r_mcbond_it 1.618 r_angle_other_deg 1.147 r_metal_ion_refined 0.515 r_symmetry_hbond_refined 0.506 r_symmetry_vdw_refined 0.363
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.748 r_scangle_it 5.922 r_scbond_it 4.009 r_mcangle_it 2.708 r_angle_refined_deg 2.388 r_mcbond_it 1.618 r_angle_other_deg 1.147 r_metal_ion_refined 0.515 r_symmetry_hbond_refined 0.506 r_symmetry_vdw_refined 0.363 r_nbd_refined 0.331 r_xyhbond_nbd_refined 0.315 r_nbd_other 0.271 r_symmetry_vdw_other 0.27 r_chiral_restr 0.162 r_nbtor_other 0.096 r_bond_refined_d 0.031 r_gen_planes_refined 0.011 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2721 Nucleic Acid Atoms Solvent Atoms 388 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing