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Structure of Protein of Unknown Function PA3463 from Pseudomonas aeruginosa PAO1
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 298 Na Citrate 1.4M, 0.1M Hepes Na, pH 7.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.81 56.26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 78.311 α = 90 b = 78.311 β = 90 c = 52.51 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 150 CCD SBC-2 2004-07-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-BM .97945 APS 19-BM
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 28.51 6791
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.002 2.07
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 28.51 6688 6366 322 98.57 0.24761 0.24761 0.24565 0.2441 0.28893 0.2808 RANDOM 42.996
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.12 -0.06 -0.12 0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.133 r_dihedral_angle_4_deg 20.833 r_dihedral_angle_3_deg 16.117 r_dihedral_angle_1_deg 6.919 r_scangle_it 5.607 r_scbond_it 3.922 r_mcangle_it 2.622 r_angle_refined_deg 2.075 r_mcbond_it 1.594 r_symmetry_vdw_refined 0.689
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.133 r_dihedral_angle_4_deg 20.833 r_dihedral_angle_3_deg 16.117 r_dihedral_angle_1_deg 6.919 r_scangle_it 5.607 r_scbond_it 3.922 r_mcangle_it 2.622 r_angle_refined_deg 2.075 r_mcbond_it 1.594 r_symmetry_vdw_refined 0.689 r_symmetry_hbond_refined 0.509 r_xyhbond_nbd_refined 0.323 r_nbtor_refined 0.3 r_nbd_refined 0.269 r_chiral_restr 0.14 r_bond_refined_d 0.022 r_gen_planes_refined 0.008 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 574 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling SHARP phasing