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human formylglycine generating enzyme, oxidised Cys refined as hydroperoxide
Crystallization Crystal Properties Matthews coefficient Solvent content 2.12 41.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.693 α = 90 b = 110.334 β = 90 c = 43.458 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.67 55.13 89.8 0.049 32.5 3.6 32268
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.67 1.72 32.9 0.131 4.5 1.7 1167
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.67 29.9 30652 1578 91.09 0.14759 0.14616 0.1575 0.17568 0.1871 RANDOM 14.893
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 0.49 -0.47
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.661 r_dihedral_angle_4_deg 16.246 r_dihedral_angle_3_deg 12.634 r_dihedral_angle_1_deg 6.525 r_scangle_it 3.01 r_scbond_it 1.893 r_angle_refined_deg 1.33 r_mcangle_it 1.323 r_angle_other_deg 0.918 r_mcbond_it 0.734
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.661 r_dihedral_angle_4_deg 16.246 r_dihedral_angle_3_deg 12.634 r_dihedral_angle_1_deg 6.525 r_scangle_it 3.01 r_scbond_it 1.893 r_angle_refined_deg 1.33 r_mcangle_it 1.323 r_angle_other_deg 0.918 r_mcbond_it 0.734 r_symmetry_vdw_refined 0.233 r_nbd_refined 0.217 r_nbd_other 0.196 r_nbtor_refined 0.185 r_symmetry_hbond_refined 0.176 r_mcbond_other 0.176 r_symmetry_vdw_other 0.173 r_xyhbond_nbd_refined 0.168 r_metal_ion_refined 0.11 r_chiral_restr 0.097 r_nbtor_other 0.082 r_bond_refined_d 0.01 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2182 Nucleic Acid Atoms Solvent Atoms 473 Heterogen Atoms 32
Software Software Software Name Purpose REFMAC refinement