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hyuman formylglycine generating enzyme, reduced form
Crystallization Crystal Properties Matthews coefficient Solvent content 2.09 41.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.633 α = 90 b = 109.365 β = 90 c = 43.364 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.58 54.88 79.9 0.14 6.3 2.9 7791
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.58 2.67 14 0.311 1.5 1.2 133
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.61 31.4 7371 389 81.99 0.15458 0.14958 0.1615 0.25202 0.2531 RANDOM 26.263
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 1.31 -1.14
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.059 r_dihedral_angle_4_deg 16.637 r_dihedral_angle_3_deg 14.764 r_dihedral_angle_1_deg 7.614 r_scangle_it 2.56 r_angle_refined_deg 1.67 r_scbond_it 1.599 r_mcangle_it 1.207 r_angle_other_deg 0.858 r_mcbond_it 0.755
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.059 r_dihedral_angle_4_deg 16.637 r_dihedral_angle_3_deg 14.764 r_dihedral_angle_1_deg 7.614 r_scangle_it 2.56 r_angle_refined_deg 1.67 r_scbond_it 1.599 r_mcangle_it 1.207 r_angle_other_deg 0.858 r_mcbond_it 0.755 r_symmetry_hbond_refined 0.32 r_symmetry_vdw_refined 0.207 r_nbd_refined 0.206 r_nbd_other 0.201 r_nbtor_refined 0.191 r_xyhbond_nbd_refined 0.191 r_symmetry_vdw_other 0.171 r_metal_ion_refined 0.118 r_mcbond_other 0.106 r_nbtor_other 0.09 r_chiral_restr 0.083 r_xyhbond_nbd_other 0.027 r_bond_refined_d 0.017 r_gen_planes_refined 0.005 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2179 Nucleic Acid Atoms Solvent Atoms 255 Heterogen Atoms 30
Software Software Software Name Purpose REFMAC refinement