1YMZ
CC45, An Artificial WW Domain Designed Using Statistical Coupling Analysis
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | DQF-COSY | 600uM CC45 protein, 100mM sodium phosphate buffer, 100mM NaCl, 90% H2O:10% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 90% H2O:10% D2O | 100mM NaCl | 7.0 | 1 atm | 298 | |
2 | 2D TOCSY | 600uM CC45 protein, 100mM sodium phosphate buffer, 100mM NaCl, 90% H2O:10% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 90% H2O:10% D2O | 100mM NaCl | 7.0 | 1 atm | 298 | |
3 | 2D NOESY | 600uM CC45 protein, 100mM sodium phosphate buffer, 100mM NaCl, 90% H2O:10% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 90% H2O:10% D2O | 100mM NaCl | 7.0 | 1 atm | 298 | |
4 | 3D_15N-separated_NOESY | 850uM CC45 protein, U-15N, 100mM sodium phosphate buffer, 100mM NaCl, 90% H2O:10% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 90% H2O:10% D2O | 100mM NaCl | 7.0 | 1 atm | 298 | |
5 | 3D_15N-separated_TOCSY | 850uM CC45 protein, U-15N, 100mM sodium phosphate buffer, 100mM NaCl, 90% H2O:10% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 90% H2O:10% D2O | 100mM NaCl | 7.0 | 1 atm | 298 | |
6 | 2D NOESY | 1mM CC45 protein, 100mM sodium phosphate buffer, 100mM NaCl, 99% D2O | 100mM sodium phosphate buffer, pH 7.0 100mM NaCl 99% D2O | 100mM NaCl | 7.0 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
restrained molecular dynamics | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (closest to the average) |
Additional NMR Experimental Information | |
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Details | Structure was determined by a combination of 2D homonuclear and 3D heteronuclear-edited methods. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.3 | Delaglio |
2 | data analysis | NMRView | 5.2.2 | Johnson |
3 | structure solution | CNS | 1.1 | Brunger |
4 | structure solution | ARIA | 1.2 | Nilges |
5 | refinement | ARIA | 1.2 | Nilges |