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Crystal Structure of Met150Gly AfNiR with Methylsulfanyl Methane Bound
Crystallization Crystal Properties Matthews coefficient Solvent content 2.15 42.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 61.968 α = 90 b = 103.012 β = 90 c = 146.903 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 84.52 70484
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.8 84.52 70484 5511 86.47 0.168 0.16842 0.16596 0.1793 0.19882 0.2083 RANDOM 19.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.35 -0.65 -0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.225 r_scangle_it 2.298 r_scbond_it 1.375 r_angle_refined_deg 1.204 r_mcangle_it 0.876 r_angle_other_deg 0.761 r_mcbond_it 0.476 r_symmetry_hbond_refined 0.333 r_symmetry_vdw_refined 0.313 r_symmetry_vdw_other 0.271
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 7.225 r_scangle_it 2.298 r_scbond_it 1.375 r_angle_refined_deg 1.204 r_mcangle_it 0.876 r_angle_other_deg 0.761 r_mcbond_it 0.476 r_symmetry_hbond_refined 0.333 r_symmetry_vdw_refined 0.313 r_symmetry_vdw_other 0.271 r_nbd_other 0.237 r_nbd_refined 0.189 r_xyhbond_nbd_refined 0.137 r_nbtor_other 0.077 r_chiral_restr 0.076 r_bond_refined_d 0.009 r_gen_planes_refined 0.005 r_gen_planes_other 0.004 r_bond_other_d 0.002 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7666 Nucleic Acid Atoms Solvent Atoms 1010 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement