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the glycogen-binding domain of the AMP-activated protein kinase beta1 subunit
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 299 PEG, monomethyl ether 5000, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 299K
Crystal Properties Matthews coefficient Solvent content 2.3 50.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.735 α = 70.72 b = 44.891 β = 68.77 c = 50.335 γ = 65.79
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 2001-07-04 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-BM-C 1.0 APS 14-BM-C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 30 95.8 0.039 23738 23738
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 81.6 81.6 0.181
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIR+NCS averaging THROUGHOUT 1.91 30 23738 23738 1213 95.63 0.195 0.227 0.19059 0.1882 0.24268 0.2385 RANDOM 34.75
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.14 0.94 -1.29 -0.29 -2.13 3.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.902 r_dihedral_angle_4_deg 19.741 r_dihedral_angle_3_deg 16.499 r_dihedral_angle_1_deg 7.818 r_scangle_it 4.195 r_mcangle_it 4.132 r_scbond_it 3.089 r_mcbond_it 2.888 r_angle_refined_deg 1.739 r_nbtor_refined 0.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.902 r_dihedral_angle_4_deg 19.741 r_dihedral_angle_3_deg 16.499 r_dihedral_angle_1_deg 7.818 r_scangle_it 4.195 r_mcangle_it 4.132 r_scbond_it 3.089 r_mcbond_it 2.888 r_angle_refined_deg 1.739 r_nbtor_refined 0.32 r_symmetry_hbond_refined 0.241 r_symmetry_vdw_refined 0.234 r_nbd_refined 0.211 r_chiral_restr 0.201 r_xyhbond_nbd_refined 0.146 r_gen_planes_refined 0.036 r_bond_refined_d 0.015
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2001 Nucleic Acid Atoms Solvent Atoms 200 Heterogen Atoms 231
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MLPHARE phasing CNS refinement REFMAC refinement PDB_EXTRACT data extraction DM phasing