2AZS
NMR structure of the N-terminal SH3 domain of Drk (calculated without NOE restraints)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | H/D amide exchange | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
2 | HNCO-based 3D experiments (non-TROSY) | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
3 | 2D Ca-Cb RDC experiment | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
4 | Ca-Ha RDC experiment | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
5 | HNCO experiment | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
6 | HN-Ha J-coupling experiment | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 | |
7 | 3D HN(CO)HB | 1mM DRKN SH3 domain 15N, 13C, 500 mM NA2SO4, 50mM Phosphate, 90% H2O, 10% D2O | 90% H2O/10% D2O | 500 mM | 6.0 | 1 atm | 293 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | THE STRUCTURES ARE BASED ON RESIDUAL DIPOLAR COUPLING RESTRAINTS,CARBONYL CHEMICAL SHIFT ANISOTROPY RESTRAINTS, DIHEDRAL ANGLE RESTRAINTS AND HYDROGEN BOND RESTRAINTS | CNS |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | CNS | 1.0 | Brunger, A.T. et al. |
2 | structure determination | CNS | 1.0 | Brunger, A.T. et al. |