☰ Navigation Tabs
Photosynthetic Reaction Center Mutant With Gly M203 Replaced With Leu
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details other WILD-TYPE RHODOBACTER SPHAEROIDES UNPUBLISHED DATA
Crystallization Crystal Properties Matthews coefficient Solvent content 4.91 74.75
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 138.613 α = 90 b = 138.613 β = 90 c = 185.274 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 ADSC M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.1 SRS PX14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 18 99.5 0.1 10 5.4 80240
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.44 97.6 0.51 2 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT WILD-TYPE RHODOBACTER SPHAEROIDES UNPUBLISHED DATA 2.4 17.96 76249 3991 99.5 0.175 0.174 0.1668 0.198 0.191 RANDOM 36.29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.22 0.61 1.22 -1.83
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.926 r_dihedral_angle_4_deg 23.368 r_dihedral_angle_3_deg 16.26 r_dihedral_angle_1_deg 5.698 r_scangle_it 3.303 r_scbond_it 2.402 r_angle_refined_deg 1.881 r_mcangle_it 1.454 r_mcbond_it 0.906 r_nbd_refined 0.217
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.926 r_dihedral_angle_4_deg 23.368 r_dihedral_angle_3_deg 16.26 r_dihedral_angle_1_deg 5.698 r_scangle_it 3.303 r_scbond_it 2.402 r_angle_refined_deg 1.881 r_mcangle_it 1.454 r_mcbond_it 0.906 r_nbd_refined 0.217 r_chiral_restr 0.215 r_symmetry_vdw_refined 0.199 r_xyhbond_nbd_refined 0.188 r_symmetry_hbond_refined 0.144 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6475 Nucleic Acid Atoms Solvent Atoms 368 Heterogen Atoms 632
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling AMoRE phasing